DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eg and Tsp47F

DIOPT Version :9

Sequence 1:NP_523633.1 Gene:Tsp42Eg / 35616 FlyBaseID:FBgn0033128 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster


Alignment Length:254 Identity:66/254 - (25%)
Similarity:107/254 - (42%) Gaps:58/254 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ACSTNVLKGFALFWDIILALFGLVVIGLGVHIIYKFEHFN--------TAAFVIIAVGVVVVLTA 58
            :|..:::|.....::::.|:.||.::..|..::.....||        ....|:|..|:::.|.|
  Fly     3 SCGPSLIKYVLFAFNVLFAISGLGILIAGAVVLADVNEFNHFVEGRVLAPPIVLIVTGLIIFLIA 67

  Fly    59 LFGALGAARESSATSKVFVVILIVLVILEVLAVGF-LWVFQTSLLINVDKTFDKLWNDQPVPIKP 122
            ..|..||.:||......|.|:|.|:.|:| ||||. ..||:..|...|..:..:       .||.
  Fly    68 SLGCFGAIKESPTLLITFAVLLAVIFIVE-LAVGIAASVFKKDLEGMVKNSLQE-------SIKR 124

  Fly   123 GNQSQIA---SLERWLDCCGNVGPSDY-------ILPPNSC----------YNGES-----DKLN 162
            .|.....   ::::.|.|||...|:|:       .||.:.|          :..||     ||..
  Fly   125 SNSEDTMAWDNIQQKLMCCGVDSPADWRTLSANKTLPGSCCQPQYIDSTVGHCLESPALGKDKYF 189

  Fly   163 LEGCRQKFLDFIADRWTTFNLVSLVLLGV-------ELICALLAYVLANSIVNRWRRSK 214
            ..||..|..|.|...       :::|:||       :::..:||..|||||  |..|:|
  Fly   190 QVGCVGKLKDRIEKN-------AIILIGVGIGIAFIQILGIVLACYLANSI--RQERAK 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EgNP_523633.1 Tetraspannin 17..202 CDD:395265 56/225 (25%)
tetraspanin_LEL 95..176 CDD:239401 25/105 (24%)
Tsp47FNP_725044.1 Tetraspannin 9..233 CDD:278750 60/238 (25%)
uroplakin_I_like_LEL 102..205 CDD:239409 25/116 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442948
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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