DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eg and Tsp42Eo

DIOPT Version :9

Sequence 1:NP_523633.1 Gene:Tsp42Eg / 35616 FlyBaseID:FBgn0033128 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_523641.2 Gene:Tsp42Eo / 35625 FlyBaseID:FBgn0033136 Length:219 Species:Drosophila melanogaster


Alignment Length:233 Identity:58/233 - (24%)
Similarity:97/233 - (41%) Gaps:51/233 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VLKGFALFWDIILALFGLVVIGLGVHIIYKFEHFN------TAAFVIIAVGVVVVLTALFGALGA 65
            |.....|...::.||.|          :|:.:.||      |..||.:.:...::|..|.|.|||
  Fly    14 VFSTLTLIVGVLAALAG----------VYELDKFNEGSAEHTEKFVQLGMAGALILAGLVGCLGA 68

  Fly    66 ARESSATSKVFVVILIVLVILEVLAVGFLWVF----QTSLLINVDKTFDKLWNDQPVPIKPGNQS 126
            .   ..:.||.||.||:|:   .|....:|..    :|..|...:.....||..:.|     :..
  Fly    69 I---FGSIKVMVVNLILLL---ALIASHIWKVSHYNETKQLDATEVYVMDLWMKELV-----HHG 122

  Fly   127 QIASLERWLDCCGNVGPSDY----ILPPNSCYNGESDKLNL-----EGC----RQKFLD-FIADR 177
            .:..|::..:|||:.|.|||    :..|.||:: ..|.::.     |||    ::.:|. :..::
  Fly   123 AMQDLQQEYECCGDKGFSDYTSLNMKVPRSCFH-TKDGIHALYPYGEGCMAAVKRAYLQIYRYEK 186

  Fly   178 WTTFNLVSLVLLGVELICALLAYVLANSIVNRWRRSKY 215
            |     |...|:|.|::..:|...|...:.|:.||..|
  Fly   187 W-----VHCGLIGYEVVGIILGITLCCQLTNKTRRYTY 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EgNP_523633.1 Tetraspannin 17..202 CDD:395265 51/208 (25%)
tetraspanin_LEL 95..176 CDD:239401 22/98 (22%)
Tsp42EoNP_523641.2 Tetraspannin 7..210 CDD:278750 54/222 (24%)
tetraspanin_LEL 110..178 CDD:239401 18/73 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001737
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.810

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