DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eg and Tsp42Eh

DIOPT Version :9

Sequence 1:NP_523633.1 Gene:Tsp42Eg / 35616 FlyBaseID:FBgn0033128 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_523634.1 Gene:Tsp42Eh / 35617 FlyBaseID:FBgn0033129 Length:231 Species:Drosophila melanogaster


Alignment Length:235 Identity:63/235 - (26%)
Similarity:113/235 - (48%) Gaps:24/235 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MACSTNVLKGFALFWDIILALFGLVVIGLGVHII---------YKFEH-FNTAAFVIIAVGVVVV 55
            |.|:|.:|:........|.||.|.::|..|..::         ...:| .:.||.:.:.:|.|:|
  Fly     1 MYCTTRLLRYVLCVISGICALGGCLLIWYGAWLLDSLSEEQRMLGMDHGEDLAAVLCVLLGTVIV 65

  Fly    56 LTALFGALGAARESSATSKVFVVILIVLVILEVLAVGFLWVFQTSLL-INVDKTFDKLWNDQPVP 119
            :.::||::..|::|......:.|:|:.|:|::::.|...:......| .::.:..|.||:.|   
  Fly    66 VASIFGSVAVAKDSRVLLICYAVLLVFLLIVQIVLVSISYAASRDFLPDSLRQGLDDLWDLQ--- 127

  Fly   120 IKPGNQSQIASLERWLDCCGNVGPSDYI-----LPPNSCYNGESDK-LNL--EGCRQKFLDFIAD 176
             ..|| |.:.:.|.||.|||.....||:     .||:.|.|.:..| |||  .||..||.:::..
  Fly   128 -HEGN-STLNTYEEWLHCCGRNSAEDYLHLEKMPPPSCCLNRDCTKHLNLFMTGCEVKFKEYVGA 190

  Fly   177 RWTTFNLVSLVLLGVELICALLAYVLANSIVNRWRRSKYY 216
            :...|:.:|..|:..|...::....|.:||.|...|.::|
  Fly   191 KTANFHSLSWFLVIFEFAGSVTTCYLVDSIRNHRDRIRFY 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EgNP_523633.1 Tetraspannin 17..202 CDD:395265 53/203 (26%)
tetraspanin_LEL 95..176 CDD:239401 28/89 (31%)
Tsp42EhNP_523634.1 Tetraspannin 8..220 CDD:278750 55/216 (25%)
tetraspanin_LEL 109..192 CDD:239401 28/87 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443021
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001737
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.840

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