DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp42Eg and Tsp42Ef

DIOPT Version :10

Sequence 1:NP_523633.1 Gene:Tsp42Eg / 35616 FlyBaseID:FBgn0033128 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_523632.2 Gene:Tsp42Ef / 35615 FlyBaseID:FBgn0033127 Length:220 Species:Drosophila melanogaster


Alignment Length:224 Identity:64/224 - (28%)
Similarity:109/224 - (48%) Gaps:18/224 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 STNVLKGFALFWDIILALFGLVVIGLGVHIIYKF---EHFNTAAFVIIAVGVVVVLTALFGALGA 65
            ||:.:|......|::..|..||:|..|:::...:   |.....|:..:.:|...:|..|:|.|.|
  Fly     3 STSSVKLIVYALDVLCTLLALVLISFGIYVAVSYNLNEIGQLTAYGYVGLGAAALLVVLWGYLSA 67

  Fly    66 ARESSATSKVFVVILIVLVILEVLAVGFLWVFQTSLLINVDKTFDKLWNDQPVPIKPGNQSQIAS 130
            .||:...:..|::.|.:::|.:...|..|...:.::..|:....:..|.::  ...||..|   .
  Fly    68 WRENVCCTVTFIIFLCLVIIAQFAVVYLLITQEKTVASNLANALEATWEEE--LNSPGAMS---L 127

  Fly   131 LERWLDCCGNVGPSDYI----LPPNSCYNGESDKLNLE-----GCRQKFLDFIADRWTTFNLVSL 186
            .:.|..|||...|.|||    |||.:|:... ||...|     |||.:|.::.......||:::|
  Fly   128 YQNWFQCCGRGSPQDYIVNERLPPETCFRNH-DKSKPENLIHTGCRVEFENYWQHLTKIFNILAL 191

  Fly   187 VLLGVELICALLAYVLANSIVNRWRRSKY 215
            ||:|.||:.::::..|.|||.|..|||.:
  Fly   192 VLIGFELLLSVISCRLCNSIRNDARRSYF 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EgNP_523633.1 Tetraspanin 17..204 CDD:459767 53/198 (27%)
tetraspanin_LEL 95..176 CDD:239401 24/89 (27%)
Tsp42EfNP_523632.2 Tetraspanin 7..209 CDD:459767 55/207 (27%)

Return to query results.
Submit another query.