DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eg and tspan17

DIOPT Version :10

Sequence 1:NP_523633.1 Gene:Tsp42Eg / 35616 FlyBaseID:FBgn0033128 Length:218 Species:Drosophila melanogaster
Sequence 2:XP_073777297.1 Gene:tspan17 / 324950 ZFINID:ZDB-GENE-030131-3673 Length:311 Species:Danio rerio


Alignment Length:268 Identity:61/268 - (22%)
Similarity:103/268 - (38%) Gaps:79/268 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LKGFALFWDIILALFGLVVIGLG------------VHIIYKFEHFNTAAFVIIAVGVVVVLTALF 60
            :|.|...::||..|.|...:|:|            :..|.....|: ..::.|.||.|:.:....
Zfish    24 VKYFLFGFNIIFWLLGAAFLGIGLWAWAEKGVLSNISSITDLGGFD-PVWLFIVVGGVMFILGFA 87

  Fly    61 GALGAARESSATSKVFVVILIVLVILEVLAVGFLWVF------QTSLLINVDKTFDKLWNDQPVP 119
            |.:||.||::...|.|.|.|.::..||:.|....:||      |.:..||.:.   |.:.|. :.
Zfish    88 GCIGALRENTFLLKFFSVFLGLIFFLELTAGILAFVFKDWIKDQLNFFINNNV---KAYRDD-ID 148

  Fly   120 IKPGNQSQIASLERWLDCCGNVGPSDYIL-----------------PPNSC--YNGESDKLNLE- 164
            :    |:.|...:.:..|||..||:|:.|                 .|.||  .:...|.||.: 
Zfish   149 L----QNLIDFAQEYWSCCGAHGPNDWNLNIYFNCTDFNPSRERCGVPFSCCVKDPAEDVLNTQC 209

  Fly   165 -------------------GCRQKFLDFIADRWTTFNLVSL--VLLGVELICALLAYVLANSI-- 206
                               ||..:|     ::|...||:.:  |.:|:.|: .:....||.::  
Zfish   210 GYDVRLQVELDQQKYIYTKGCVGQF-----EKWLQDNLIVVAGVFVGIALL-QIFGICLAQNLKC 268

  Fly   207 ---VNRWR 211
               .:.||
Zfish   269 LDSTSSWR 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EgNP_523633.1 Tetraspanin 17..204 CDD:459767 56/245 (23%)
tetraspanin_LEL 95..176 CDD:239401 25/125 (20%)
tspan17XP_073777297.1 None

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