DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eg and cd82b

DIOPT Version :10

Sequence 1:NP_523633.1 Gene:Tsp42Eg / 35616 FlyBaseID:FBgn0033128 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_997828.1 Gene:cd82b / 324137 ZFINID:ZDB-GENE-030131-2857 Length:256 Species:Danio rerio


Alignment Length:258 Identity:58/258 - (22%)
Similarity:104/258 - (40%) Gaps:82/258 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KGFALFWDIILALFGLVVIGLGVHIIYKFEHFNT-----------AAFVIIAVGVVVVLTALFGA 62
            |.|...::::..:.|.|::|.|:.:....:.|.|           .|:::|.:|.:.:|....|.
Zfish    10 KYFLFLFNLLFFILGAVIMGFGLWVRLDSQSFLTVLQESSTSLKVGAYILIGIGSLSMLMGFLGC 74

  Fly    63 LGAARESSATSKVFVVILIVLVILEVLAVGFLWVFQTSL------------LINV---DKTFDKL 112
            :||..|......::...|::::|.:|.|...:: ||..|            |:|.   :.|.:..
Zfish    75 IGAIYEIRCLLGLYFTCLLLILIAQVTAAVLIY-FQRDLLKGETYNIVNKILVNYTGSNNTSEDA 138

  Fly   113 WNDQPVPIKPGNQSQIASLERWLDCCGNVGPSDY-----------ILPPNSCYN---GESDKLNL 163
            |:               .::|.:.|||..|.||:           ||.|.||.|   ..|||   
Zfish   139 WD---------------YIQRTMKCCGWSGQSDWKENVMIKNNSKILYPCSCRNESISGSDK--- 185

  Fly   164 EGCRQK-FLDFIADRWTTFN---LVSL---------VLLGV-------ELICALLAYVLANSI 206
               ::| |.:.::.:|..|.   :.||         |:|||       ||:..:|:..|..|:
Zfish   186 ---QEKGFCEGLSPQWPVFTKGCISSLEDWILRNCGVILGVCVGIAVIELLGMILSMCLCKSV 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EgNP_523633.1 Tetraspanin 17..204 CDD:459767 55/246 (22%)
tetraspanin_LEL 95..176 CDD:239401 25/110 (23%)
cd82bNP_997828.1 Tetraspanin 24..243 CDD:459767 55/240 (23%)
CD37_CD82_like_LEL 106..218 CDD:239413 29/133 (22%)

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