DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eg and cd82a

DIOPT Version :10

Sequence 1:NP_523633.1 Gene:Tsp42Eg / 35616 FlyBaseID:FBgn0033128 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_997826.3 Gene:cd82a / 324098 ZFINID:ZDB-GENE-030131-2818 Length:256 Species:Danio rerio


Alignment Length:252 Identity:62/252 - (24%)
Similarity:102/252 - (40%) Gaps:59/252 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 CSTNVLKGFALFWDIILALFGLVVIGLGVHIIYKFEH-----------FNTAAFVIIAVGVVVVL 56
            |.| ..|.|...::.|..:||..::|.|:.|:...:.           ....::::|.||...:|
Zfish     5 CIT-ATKYFLFLFNFIFFIFGATIMGFGLWILLDNQSLIAVLQESSVILKVVSYILIGVGSFSML 68

  Fly    57 TALFGALGAARESSATSKVFVVILIVLVILEVLAVGFLWVFQTSLLINVDKT-FDKLWNDQPVPI 120
            ....|.|||..|......::...|: |::|..:||..|..||..||    || .||:.: |.|..
Zfish    69 LGFLGCLGAIYEIRCLLGLYFTCLL-LILLAQVAVSILIYFQRDLL----KTEADKIVS-QVVAN 127

  Fly   121 KPGNQSQIAS-----LERWLDCCGNVGPSDY--------------------------ILPPNS-C 153
            .|| |::.|.     |:|.:.|||..|..|:                          |:|.|. |
Zfish   128 YPG-QNKTAEQAWDYLQRTMQCCGWNGRMDWDENHIIKNNTVPLYPCSCHNYSIQAPIVPDNGFC 191

  Fly   154 YNGESD-KLNLEGCRQKFLDFIADRWTTFNLVSLVLLGV---ELICALLAYVLANSI 206
            ....|| .:...||.:....::   :|.:.::..:.|||   ||:..:.:..|..|:
Zfish   192 QASSSDWPIYQTGCLEHVGSWL---FTNYGIILGICLGVAVIELLGMIFSMGLCKSV 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EgNP_523633.1 Tetraspanin 17..204 CDD:459767 57/234 (24%)
tetraspanin_LEL 95..176 CDD:239401 29/114 (25%)
cd82aNP_997826.3 None

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