Protein Alignment Tsp42Eg and Tspan1

DIOPT Version :10

• Sequence 1: NP_523633.1
• Gene: Tsp42Eg / 35616
• FlyBaseID: FBgn0033128
• Length: 218
• Species: Drosophila melanogaster
• Sequence 2: NP_001004236.1
• Gene: Tspan1 / 298436
• RGDID: 1303308
• Length: 241
• Species: Rattus norvegicus
• Alignment Length: 248
• Identity: 48/248 - (19%)
• Similarity: 100/248 - (40%)
• Gaps: 66/248 - (26%)

  Fly     8 LKGFALFWDIILALFGLVVIGLGVHI-------IYKFEHFNTAA-------FVIIAVGVVVVLTA 58
            :|...:.:::::.|.|..::.:|:.:       :..|...:::|       :.:||.|.|:.:..
  Rat     7 IKVMMILFNLLIFLCGAALLAVGIWVSVDGTSFLKAFGSLSSSAMQFVNVGYFLIAAGAVLFILG 71

  Fly    59 LFGALGAARESSATSKVFVVILIVLVILEV--LAVGFLWV-----FQTSLLI-NVDK------TF 109
            ..|..||..|:.....:|..||:::.|.|:  ..|..::.     |.|.|:: .::|      .|
  Rat    72 FLGCYGAHSENKCVLMMFFSILLIIFIAEIAGAVVALVYTTMAEQFLTFLVVPAIEKDYGYQTEF 136

  Fly   110 DKLWNDQPVPIKPGNQSQIASLERWLDCCGNVGPSDY----------ILPPNSCYNG-------- 156
            .::||               |....|.|||....:|:          :.||..|.|.
  Rat   137 TQVWN---------------STMEGLHCCGFNNYTDFNSSRFVKENKVFPPFCCANNTDSHTVEP 186

  Fly   157 ----ESDKLNLEGCRQKFLDFIADRWTTFNLVSLVLLGVELICALLA-YVLAN 204
                ::..:|::||.::.|..|.....|...|::.:..:||...::: |:..|
  Rat   187 CTEDKAKSMNVQGCFKQILQKIRTNAVTVGGVAVGVAALELAAMVVSMYLYCN 239

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Tsp42Eg	NP_523633.1	Tetraspanin	17..204	CDD:459767	46/237 (19%)
		tetraspanin_LEL	95..176	CDD:239401	22/114 (19%)
Tspan1	NP_001004236.1	Tetraspanin	7..>151	CDD:459767	30/158 (19%)
		uroplakin_I_like_LEL	106..211	CDD:239409	23/119 (19%)