DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eg and Cd63

DIOPT Version :10

Sequence 1:NP_523633.1 Gene:Tsp42Eg / 35616 FlyBaseID:FBgn0033128 Length:218 Species:Drosophila melanogaster
Sequence 2:XP_063119178.1 Gene:Cd63 / 29186 RGDID:62080 Length:304 Species:Rattus norvegicus


Alignment Length:216 Identity:55/216 - (25%)
Similarity:93/216 - (43%) Gaps:46/216 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LFWDIILAL----FGLVVIGLGVHIIYK--FEHFNTAA----FVIIAVGVVVVLTALFGALGAAR 67
            |.:.::||.    .||:.||:.|.::.|  ..|..||.    .||||||..:.|.|..|..||.:
  Rat    37 LLYVLLLAFCACAVGLIAIGVAVQVVLKQAITHETTAGSLLPVVIIAVGAFLFLVAFVGCCGACK 101

  Fly    68 ESSATSKVFVVILIVLVILEVLAVGFLWVFQTSLLINVDKTFDK-----LWNDQPVPIKPGNQSQ 127
            |:......|.:.|.:::::||......:||:..:.....|:|.|     |.:::...|       
  Rat   102 ENYCLMITFAIFLSLIMLVEVAVAIAGYVFRDQVKSEFSKSFQKQMQNYLTDNKTATI------- 159

  Fly   128 IASLERWLDCCGNVGPSDY---------ILPPNSCYN-----GESDK---LNLEGCRQKFLDFIA 175
            :..|::...|||....:|:         .:|.:.|.|     |...|   ::.:||    ::.||
  Rat   160 LDKLQKENKCCGASNYTDWERIPGMAKDRVPDSCCINITVGCGNDFKESTIHTQGC----VETIA 220

  Fly   176 DRWTTFN--LVSLVLLGVELI 194
             .|...|  ||:...||:..:
  Rat   221 -AWLRKNVLLVAGAALGIAFV 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EgNP_523633.1 Tetraspanin 17..204 CDD:459767 54/212 (25%)
tetraspanin_LEL 95..176 CDD:239401 20/102 (20%)
Cd63XP_063119178.1 None

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