DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eg and Cd81

DIOPT Version :10

Sequence 1:NP_523633.1 Gene:Tsp42Eg / 35616 FlyBaseID:FBgn0033128 Length:218 Species:Drosophila melanogaster
Sequence 2:XP_063138178.1 Gene:Cd81 / 25621 RGDID:2315 Length:248 Species:Rattus norvegicus


Alignment Length:234 Identity:50/234 - (21%)
Similarity:93/234 - (39%) Gaps:44/234 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TNVLKGFALFWDIILALFGLVVIGLGVHIIYKFEH--------------------FNTAAFVIIA 49
            |..:|.....::.:..|.|.|::|:.:.:    .|                    |....:::||
  Rat     7 TKCIKYLLFVFNFVFWLAGGVILGVALWL----RHDPQTTSLLYLELGDKPAPSTFYVGIYILIA 67

  Fly    50 VGVVVVLTALFGALGAARESSATSKVFVVILIVLVILEVLAVGFLWVF--QTSLLINVDKTFDKL 112
            ||.|::.....|..||.:||......|...|::|...|| |.| :|.|  :..:..:|.:.:|:.
  Rat    68 VGAVMMFVGFLGCYGAIQESQCLLGTFFTCLVILFACEV-AAG-IWGFVNKDQIAKDVKQFYDQA 130

  Fly   113 WNDQPVPIKPGNQSQ--IASLERWLDCCGN---VGPSDYILPPNSCYNGESD--KLNLEGCRQKF 170
            . .|.|.....|.::  :.:....|:|||:   ...:..:|..:.|.:..:.  :|..|.|.||.
  Rat   131 L-QQAVMDDDANNAKAVVKTFHETLNCCGSNTLTTLTTTVLRNSLCPSSSNSFTQLLKEDCHQKI 194

  Fly   171 LDFIADRWTTFNLVSLVLLGVELICALLAYVLANSIVNR 209
            .:..:.:        |.|:|:..|...:..|....:|.|
  Rat   195 DELFSGK--------LYLIGIAAIVVAVIMVSTGPLVGR 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EgNP_523633.1 Tetraspanin 17..204 CDD:459767 46/215 (21%)
tetraspanin_LEL 95..176 CDD:239401 18/89 (20%)
Cd81XP_063138178.1 None

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