DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eg and tsp-17

DIOPT Version :9

Sequence 1:NP_523633.1 Gene:Tsp42Eg / 35616 FlyBaseID:FBgn0033128 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_001129920.2 Gene:tsp-17 / 192067 WormBaseID:WBGene00006643 Length:312 Species:Caenorhabditis elegans


Alignment Length:286 Identity:60/286 - (20%)
Similarity:100/286 - (34%) Gaps:103/286 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 FWDIILALFGLVVIGLGV------HIIYKFEHFN-------TAAFVIIAVGVVVVLTALFGALGA 65
            :|   |:..|.|.:||.:      :.|....||:       .:|:|.:..|...:|....|..||
 Worm    22 YW---LSALGHVFLGLWMLLDPKRNYILDLVHFSENDPLLKASAYVSLVCGCAQLLVGFLGLCGA 83

  Fly    66 ARESSATSKVFVVILIVLVILEVLAVGFLWVFQTSLLIN-------VDKTFDKLWNDQPV-PI-- 120
            ...|......||:.||...:.:| |:|.|.:|......|       .:.|:::...|:.| |:  
 Worm    84 VNRSRFLLLAFVMFLIGTFLADV-AMGTLSLFYKDKFSNNYMGVYLKNLTYNRYSRDRWVLPLMD 147

  Fly   121 --------------------------KPGNQ---SQIASLERWLDCCGNVGPSDYI--------- 147
                                      :|.|:   ..|..|:.:..|||::||:|||         
 Worm   148 TIQFYVYSVKENVREIVKSKYGVMTSEPENKMVTEFIDKLQFYEKCCGSLGPTDYISSRWSQSTN 212

  Fly   148 ---------LPPNSC---YNGESDKLN--------------------LEGCRQKFLDFIADR-WT 179
                     |.|.||   ..|.| .||                    ..||.::.:.:..:: |.
 Worm   213 QDSEEIESPLFPVSCCTQITGAS-ALNPLAKSYARCQQIGANRQWRHAVGCSERLMSWFNEQIWI 276

  Fly   180 ----TFNLVSLVLLGVELICALLAYV 201
                .|.....::||:.|.|.|::.:
 Worm   277 FVGFGFGSALTMMLGICLSCCLISKI 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EgNP_523633.1 Tetraspannin 17..202 CDD:395265 59/283 (21%)
tetraspanin_LEL 95..176 CDD:239401 28/160 (18%)
tsp-17NP_001129920.2 Tetraspannin 11..298 CDD:366035 59/280 (21%)
CD37_CD82_like_LEL 153..275 CDD:239413 22/122 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1051357at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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