DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eg and tsp-7

DIOPT Version :9

Sequence 1:NP_523633.1 Gene:Tsp42Eg / 35616 FlyBaseID:FBgn0033128 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_492636.1 Gene:tsp-7 / 192062 WormBaseID:WBGene00006633 Length:232 Species:Caenorhabditis elegans


Alignment Length:240 Identity:47/240 - (19%)
Similarity:87/240 - (36%) Gaps:67/240 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VLKGFALFWDIILALFGLVVIGLGVHIIYKFEHF--------NTAAFVIIAVGVVVVLTALFGAL 63
            ::|......:::|.:.||.:|.:|..:..||::.        .....:::.:|.:..|....|..
 Worm     8 IVKYLLFLANLVLWVGGLSLIIVGSILQLKFDNVLDILGDERLATPILLLVIGSLCTLLGFLGCC 72

  Fly    64 GAARESSATSKVFVVILIVLVILEVLAVGFLWVFQTSLLINVDKTFDKLWNDQPVPIKPGNQSQI 128
            ||.||:...:..|.|:|.:|:..|:.||...:....|..:.:                 |||.|.
 Worm    73 GAIRENYCLTVSFAVLLALLITCEIAAVIIGYALHDSFRLGI-----------------GNQLQT 120

  Fly   129 ASL---------ERW------LDCCGNVGPSDYI----LPPNSCYNGESDKLNLEGCRQKFLDFI 174
            ..:         ..|      .:|||....||::    :|.:.|..      .:|||.::.....
 Worm   121 GMVRYHESRGVESAWDKTHQLFECCGVTNSSDWLTFTTIPDSCCIE------EIEGCARENAPLF 179

  Fly   175 -------ADRWTTFN----------LVSLVLLGVELICALLAYVL 202
                   .::|...|          |.::.|:||...|.|...:|
 Worm   180 EPGCIHSVEQWVLKNGAMVGGICAVLAAIQLVGVCFACCLSKSIL 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EgNP_523633.1 Tetraspannin 17..202 CDD:395265 45/228 (20%)
tetraspanin_LEL 95..176 CDD:239401 16/106 (15%)
tsp-7NP_492636.1 Tetraspannin 8..223 CDD:278750 46/237 (19%)
NET-5_like_LEL 104..195 CDD:239418 17/113 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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