DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eg and tsp-5

DIOPT Version :9

Sequence 1:NP_523633.1 Gene:Tsp42Eg / 35616 FlyBaseID:FBgn0033128 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_502621.3 Gene:tsp-5 / 192061 WormBaseID:WBGene00006631 Length:241 Species:Caenorhabditis elegans


Alignment Length:246 Identity:58/246 - (23%)
Similarity:99/246 - (40%) Gaps:56/246 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 NVLKGFALFWDIILALFGLVVIGLGV------HIIYKFEHF-------------NTAAFVI---- 47
            ||....|.|...||.| ||:|:|:.:      .::::||..             |...|.:    
 Worm     4 NVCGKLANFLFFILNL-GLIVVGVIITWYSIWMVLHQFEVTVARTSLVNLLSVDNIECFYVYRTI 67

  Fly    48 -IAVGVVVVLTALFGALGAARESSATSKVFVVILIVLVILEVLAVGFLWVFQTSLLINVD---KT 108
             |.:|..:|:....|.......|.....|.:|::.::.:::::|:       ...|.|.|   :.
 Worm    68 SIMIGGCMVVLGFCGCFAVGFGSKTALSVHLVLVFIVFVVKIVAI-------VMFLANNDHLRRE 125

  Fly   109 FDKLWNDQPVPIKPGNQSQIASLERW----LDCCGNVGPSDYILP----PNSCYNGESDK-LNLE 164
            |..::.|:.| ....|.|:..:...|    |.|||..|..|: ||    |.||..|..:. :.:|
 Worm   126 FVGVYRDELV-ANYHNNSRTKNTLDWVHTSLKCCGANGCEDF-LPAGNFPTSCECGTKNAVVRME 188

  Fly   165 GCRQKFLDFIADRWTTFNLVSLVLLGVELICALL---AYVLANSIVNRWRR 212
            ||       ....|..|...:|.:..:.|||.|:   ..:.|..:::|.||
 Worm   189 GC-------ALITWAVFEDGTLQVAFLGLICMLIELGLMIFAAIVIDRIRR 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EgNP_523633.1 Tetraspannin 17..202 CDD:395265 50/223 (22%)
tetraspanin_LEL 95..176 CDD:239401 24/92 (26%)
tsp-5NP_502621.3 Tetraspannin 11..223 CDD:278750 51/228 (22%)
tetraspanin_LEL 116..191 CDD:239401 24/83 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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