DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eg and tsp-9

DIOPT Version :9

Sequence 1:NP_523633.1 Gene:Tsp42Eg / 35616 FlyBaseID:FBgn0033128 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_508232.1 Gene:tsp-9 / 180472 WormBaseID:WBGene00006635 Length:233 Species:Caenorhabditis elegans


Alignment Length:261 Identity:50/261 - (19%)
Similarity:97/261 - (37%) Gaps:74/261 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MACSTNVLKGFALFWDIILALFGLVVIG----------LGVH--------------IIYKFEHFN 41
            |.|..:.:|......:..:.:||.::.|          .|.|              ::.:...:.
 Worm     1 MVCGNSCIKLLFFVINFFICIFGALICGFSLWANLDKNFGSHLSDFVRQIEGIDQKLVNEIAEYQ 65

  Fly    42 TAAFVIIAVGVVVVLTALFGALGAARESSATSKVFVVILIVLVILEVLAVGFLWVFQTSLLINVD 106
            .:.::::|||.::.|...||..||..||.....:|:.|:::|..:|:.|..|....:...:.::.
 Worm    66 ASLWILVAVGALLFLVGFFGCCGAGCESPVLLGLFIFIIVILTAVELGATVFAMTNREEFVSSIQ 130

  Fly   107 K-------TFDKLWNDQPVPIKPGNQSQIASLERWLDCCGNV-------------GPSDYILPPN 151
            :       |::...|     |||        ::....|||..             ||.....|.|
 Worm   131 QVLKKSSATYELRKN-----IKP--------IQNVFQCCGATAQTQNRYIQDGLCGPEPLSAPVN 182

  Fly   152 SCYNGESDKLNLEGCRQKFLDFIADRW-TTFNLVSLVLLGVELICALLAYVLANSIVNRWRRSKY 215
             |:    |:::          .:...| .:..:|:.:||.:||...|.:.:|..| ....|.:.|
 Worm   183 -CF----DRIS----------HMVQSWGESIVVVAFLLLAIELFAILFSCILCRS-SQEIRYTPY 231

  Fly   216 Y 216
            |
 Worm   232 Y 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EgNP_523633.1 Tetraspannin 17..202 CDD:395265 42/229 (18%)
tetraspanin_LEL 95..176 CDD:239401 14/100 (14%)
tsp-9NP_508232.1 Tetraspannin 7..222 CDD:278750 44/242 (18%)
tetraspanin_LEL 116..>167 CDD:243179 9/63 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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