DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eg and tsp-6

DIOPT Version :9

Sequence 1:NP_523633.1 Gene:Tsp42Eg / 35616 FlyBaseID:FBgn0033128 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_001294830.1 Gene:tsp-6 / 13219712 WormBaseID:WBGene00006632 Length:237 Species:Caenorhabditis elegans


Alignment Length:252 Identity:58/252 - (23%)
Similarity:109/252 - (43%) Gaps:60/252 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 CSTNVLKGFALFW--DIILALFGLVVIGLGVHIIYKFEHFNTAA--------------------- 44
            |....:|.|  ||  :.:..:.|.:::||.:.::......||.|                     
 Worm     5 CGNKCVKYF--FWLINFLFFVLGAIIVGLSIWMLVDKNSLNTVASTVKVDLSQILSQVNIQQLNS 67

  Fly    45 --FVIIAVGVVVVLTALFGALGAARESSATSKVFVVILIVLVILEVLAVGFLWVFQTSLLINVDK 107
              :|.|.:|..:::...||..|:..||.....::.:::::|.::||:|:...:|.:|    |:.:
 Worm    68 FLYVAIVIGGALLVLGFFGCCGSCCESICAISIYFILVLILFVVEVVAIVLYFVNKT----NLQQ 128

  Fly   108 TFDKLWNDQPVPIKPGNQSQI----ASLERWLDCCGNVGPSDYILP----PNSCYNGESDKLNLE 164
            .|..:|.|:.|. |...|.||    ..::..|.|||..|.|||| |    |.||   :...:...
 Worm   129 GFQTIWRDELVS-KYNTQQQIHQVLDQIQSSLQCCGASGCSDYI-PYGAFPTSC---QCATIQQA 188

  Fly   165 GCRQKFLDFIADRWTTFN-------LVSLVLLGVELICALLAYVLANSIVNRWRRSK 214
            ||....       |.:|.       .|.:::|.|||:..:.:.::..::  :.:||:
 Worm   189 GCATVI-------WNSFESSLIYVAFVGIIILFVELLAMIFSCIIIGAV--KEKRSQ 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EgNP_523633.1 Tetraspannin 17..202 CDD:395265 51/222 (23%)
tetraspanin_LEL 95..176 CDD:239401 26/88 (30%)
tsp-6NP_001294830.1 Tetraspannin 9..227 CDD:278750 55/235 (23%)
tetraspanin_LEL 120..202 CDD:239401 28/97 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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