DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eg and Cd9

DIOPT Version :10

Sequence 1:NP_523633.1 Gene:Tsp42Eg / 35616 FlyBaseID:FBgn0033128 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_031683.1 Gene:Cd9 / 12527 MGIID:88348 Length:226 Species:Mus musculus


Alignment Length:233 Identity:48/233 - (20%)
Similarity:105/233 - (45%) Gaps:39/233 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 CSTNVLKGF-ALFWDIILALFGLVVIGLGVHI--------IYKFEH----FNTAAFVIIAVGVVV 54
            |...:|.|| .:||     |.|:.|:.:|:.:        |::.|:    |.|..:::|..|.::
Mouse     9 CIKYLLFGFNFIFW-----LAGIAVLAIGLWLRFDSQTKSIFEQENNHSSFYTGVYILIGAGALM 68

  Fly    55 VLTALFGALGAARESSATSKVFVVILIVLVILEVLAVGFLWVFQTSLLINVDK----TFDKLWN- 114
            :|....|..||.:||.....:|...|:|:..:|:.|..:.:..:..::..:.:    |:.||.: 
Mouse    69 MLVGFLGCCGAVQESQCMLGLFFGFLLVIFAIEIAAAVWGYTHKDEVIKELQEFYKDTYQKLRSK 133

  Fly   115 DQPVPIKPGNQSQIASLERWLDCCGNVGPSDYILPPNSCYNGESDKLNLEGCRQKFLDFIADRWT 179
            |:|      .:..:.::...|||||..||.:..:..........:...::.|.:...:...::  
Mouse   134 DEP------QRETLKAIHMALDCCGIAGPLEQFISDTCPKKQLLESFQVKPCPEAISEVFNNK-- 190

  Fly   180 TFNLVSLVLLGVELIC---ALLAYVLANSIVNRWRRSK 214
             |:::..|.:|:.::.   .:.:.:|..:|    |||:
Mouse   191 -FHIIGAVGIGIAVVMIFGMIFSMILCCAI----RRSR 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EgNP_523633.1 Tetraspanin 17..204 CDD:459767 38/206 (18%)
tetraspanin_LEL 95..176 CDD:239401 13/85 (15%)
Cd9NP_031683.1 Tetraspanin 10..217 CDD:459767 43/220 (20%)
CD9_LEL 109..191 CDD:239405 13/90 (14%)

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