DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eg and Cd63

DIOPT Version :10

Sequence 1:NP_523633.1 Gene:Tsp42Eg / 35616 FlyBaseID:FBgn0033128 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_031679.1 Gene:Cd63 / 12512 MGIID:99529 Length:238 Species:Mus musculus


Alignment Length:236 Identity:62/236 - (26%)
Similarity:104/236 - (44%) Gaps:46/236 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LFWDIILAL----FGLVVIGLGVHIIYK--FEHFNTAA----FVIIAVGVVVVLTALFGALGAAR 67
            |.:.::||.    .||:.||:.|.::.|  ..|..||.    .||||||..:.|.|..|..||.:
Mouse    13 LLYVLLLAFCACAVGLIAIGVAVQVVLKQAITHETTAGSLLPVVIIAVGAFLFLVAFVGCCGACK 77

  Fly    68 ESSATSKVFVVILIVLVILEVLAVGFLWVFQTSLLINVDKTFDKLWNDQPVPIKPGNQSQIA-SL 131
            |:......|.:.|.:::::||......:||:..:....:|:|.:...:.   :|....:.|. .|
Mouse    78 ENYCLMITFAIFLSLIMLVEVAVAIAGYVFRDQVKSEFNKSFQQQMQNY---LKDNKTATILDKL 139

  Fly   132 ERWLDCCGNVGPSDY---------ILPPNSCYN-----GESDK---LNLEGCRQKFLDFIADRWT 179
            ::..:|||....:|:         .:|.:.|.|     |...|   ::.:||    ::.|| .|.
Mouse   140 QKENNCCGASNYTDWENIPGMAKDRVPDSCCINITVGCGNDFKESTIHTQGC----VETIA-IWL 199

  Fly   180 TFN--LVSLVLLG---VELICALLAYVLANSIVNRWRRSKY 215
            ..|  ||:...||   ||::..:.:..|..||     ||.|
Mouse   200 RKNILLVAAAALGIAFVEVLGIIFSCCLVKSI-----RSGY 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EgNP_523633.1 Tetraspanin 17..204 CDD:459767 56/219 (26%)
tetraspanin_LEL 95..176 CDD:239401 19/98 (19%)
Cd63NP_031679.1 Tetraspanin 10..229 CDD:459767 57/223 (26%)
CD63_LEL 105..203 CDD:239419 21/105 (20%)
Lysosomal targeting motif. /evidence=ECO:0000269|PubMed:21041449 234..238 1/2 (50%)

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