DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eg and Cd37

DIOPT Version :10

Sequence 1:NP_523633.1 Gene:Tsp42Eg / 35616 FlyBaseID:FBgn0033128 Length:218 Species:Drosophila melanogaster
Sequence 2:XP_006540655.1 Gene:Cd37 / 12493 MGIID:88330 Length:396 Species:Mus musculus


Alignment Length:257 Identity:54/257 - (21%)
Similarity:98/257 - (38%) Gaps:78/257 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 NVLKGFALFWDIILALFGLVVIGLGVHIIY---KFEHFNTAAFV-------IIAV-GVVVVLTAL 59
            :::|.|...:::...:.|.::...|..|:.   .|..|...:||       ::|| ||:.:..||
Mouse    31 SLIKYFLFVFNLFFFVLGGLIFCFGTWILIDKTSFVSFVGLSFVPLQTWSKVLAVSGVLTMALAL 95

  Fly    60 FGALGAARESSATSKVFVVILIVLVILEVLAVGFLWVFQTSLLINVDKTFDKLWNDQPVPIKPGN 124
            .|.:||.:|......::..:|::|...::.    |.:..::..:.:::...:|.. :.:.....|
Mouse    96 LGCVGALKELRCLLGLYFGMLLLLFATQIT----LGILISTQRVRLERRVQELVL-RTIQSYRTN 155

  Fly   125 QSQIASLERW------LDCCGNVGPSDY----ILPPN---------SCYNGES-------DKLNL 163
            ..:.|:.|.|      |.|||...|.|:    :|..|         ||||..:       |||..
Mouse   156 PDETAAEESWDYAQFQLRCCGWQSPRDWNKAQMLKANESEEPFVPCSCYNSTATNDSTVFDKLFF 220

  Fly   164 -----------------------------EGCRQKFLDFIADRWTTFNLVSLV--LLGVELI 194
                                         |||.|..     .:|...|::|:|  .|||.|:
Mouse   221 SQLSRLGPRAKLRQTADICALPAKAHIYREGCAQSL-----QKWLHNNIISIVGICLGVGLL 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EgNP_523633.1 Tetraspanin 17..204 CDD:459767 52/246 (21%)
tetraspanin_LEL 95..176 CDD:239401 24/135 (18%)
Cd37XP_006540655.1 Tetraspanin 48..>176 CDD:459767 27/132 (20%)
CD37_CD82_like_LEL 130..265 CDD:239413 26/140 (19%)

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