DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eg and TSPAN1

DIOPT Version :10

Sequence 1:NP_523633.1 Gene:Tsp42Eg / 35616 FlyBaseID:FBgn0033128 Length:218 Species:Drosophila melanogaster
Sequence 2:XP_011538762.1 Gene:TSPAN1 / 10103 HGNCID:20657 Length:258 Species:Homo sapiens


Alignment Length:242 Identity:51/242 - (21%)
Similarity:88/242 - (36%) Gaps:66/242 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MACSTNVLKGFALFWDIILALFGLVVIGLGVHI---------IY-----KFEHFNTAAFVIIAVG 51
            |.| .:.:|...:.:::::.|.|..::.:|:.:         |:     ....|....:.:||.|
Human     1 MQC-FSFIKTMMILFNLLIFLCGAALLAVGIWVSIDGASFLKIFGPLSSSAMQFVNVGYFLIAAG 64

  Fly    52 VVVVLTALFGALGAARESSATSKVFVVILIVLVILEVLAVGFLWVFQT------SLLI------- 103
            |||......|..||..||......|..||:::.|.||.|.....|:.|      :||:       
Human    65 VVVFALGFLGCYGAKTESKCALVTFFFILLLIFIAEVAAAVVALVYTTMAEHFLTLLVVPAIKKD 129

  Fly   104 -NVDKTFDKLWNDQPVPIKPGNQSQIASLERWLDCCGNVGPSDY----------ILPPNSCYNGE 157
             ...:.|.::||               :..:.|.|||....:|:          ..||..|.:..
Human   130 YGSQEDFTQVWN---------------TTMKGLKCCGFTNYTDFEDSPYFKENSAFPPFCCNDNV 179

  Fly   158 SDKLN------------LEGCRQKFLDFIADRWTTFNLVSLVLLGVE 192
            ::..|            :|||..:.|..|.....|...|:..:.|:|
Human   180 TNTANETCTKQKAHDQKVEGCFNQLLYDIRTNAVTVGGVAAGIGGLE 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EgNP_523633.1 Tetraspanin 17..204 CDD:459767 48/226 (21%)
tetraspanin_LEL 95..176 CDD:239401 21/116 (18%)
TSPAN1XP_011538762.1 Tetraspanin 7..>151 CDD:459767 33/158 (21%)
uroplakin_I_like_LEL 110..212 CDD:239409 20/116 (17%)

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