DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eg and LOC100487852

DIOPT Version :10

Sequence 1:NP_523633.1 Gene:Tsp42Eg / 35616 FlyBaseID:FBgn0033128 Length:218 Species:Drosophila melanogaster
Sequence 2:XP_031752215.1 Gene:LOC100487852 / 100487852 XenbaseID:XB-GENE-29078947 Length:244 Species:Xenopus tropicalis


Alignment Length:211 Identity:46/211 - (21%)
Similarity:95/211 - (45%) Gaps:52/211 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VLK--GFALF-WDIILALFGLVVIGLGVHIIYKFEHF----------NTAAFVIIAVGVVVVLTA 58
            |||  .:.:| :::::.:.|:.::.:|:.::...:.|          :...::::.:|:.:.|..
 Frog     3 VLKFVTYMMFLFNVLIFIGGVCLLAVGIWLVADPDGFQRVVISNPLLSAGGYILLIIGIALSLLG 67

  Fly    59 LFGALGAARESSATSKVFVVILIVLVILE----VLAVGF-LWVFQTSLLINVDKTFDKLWNDQPV 118
            ..|..||.|::.....:|.|::::..|:|    :||:.: ..|.|...|:.:.:.:         
 Frog    68 FLGCFGAIRKNKTLLLLFFVLVLLFFIMELTGVILALSYQKTVKQEQFLVELQRFY--------- 123

  Fly   119 PIKPGNQSQIASLERW------LDCCGNVGPSDY--------ILP----PNSCY---NGESDK-L 161
              |..|.|::.| :.|      |.|||..|.:|:        :.|    |::|.   |..|.| |
 Frog   124 --KGDNASEVFS-QSWNTIMIALSCCGISGLNDFGNRSHFHEMYPSTPWPDACCRRDNPVSGKIL 185

  Fly   162 NLEGCRQKFLDFIADR 177
            :.|.|.|...||..|:
 Frog   186 DREKCMQNTPDFTNDQ 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EgNP_523633.1 Tetraspanin 17..204 CDD:459767 42/198 (21%)
tetraspanin_LEL 95..176 CDD:239401 26/102 (25%)
LOC100487852XP_031752215.1 Tetraspanin 9..>147 CDD:459767 26/149 (17%)
uroplakin_I_like_LEL 102..215 CDD:239409 29/112 (26%)

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