DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ef and Tspan15

DIOPT Version :10

Sequence 1:NP_523632.2 Gene:Tsp42Ef / 35615 FlyBaseID:FBgn0033127 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_932113.2 Gene:Tspan15 / 70423 MGIID:1917673 Length:294 Species:Mus musculus


Alignment Length:232 Identity:59/232 - (25%)
Similarity:99/232 - (42%) Gaps:54/232 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LIVYALDVLCTLLALVLISFGIYVAV---SYNLNEIGQLT-AYGYVGLGAAALLVVLWGYLSAWR 69
            ||:|:  .:..|:..:::|.|||...   .|...|...|. |...:.||....:|...|.|::.|
Mouse    24 LIIYS--TVFWLIGGLVLSVGIYAEAERQKYKTLESAFLAPAIILILLGVVMFIVSFIGVLASLR 86

  Fly    70 ENVCCTVTF--IIFLCLVIIAQFAVVYLLITQEKTV---ASNLANALEATWEEELNSPGAMSLYQ 129
            :|:|...:|  |:.:|||:.....:| .||.:.:|:   ..|:...:| .:.::|:....|...|
Mouse    87 DNLCLLQSFMYILGICLVMELIGGIV-ALIFRNQTIDFLNDNIRRGIE-NYYDDLDFKNIMDFVQ 149

  Fly   130 NWFQCCGRGSPQDYIVNE------------RLPPETCFRNH-------------DKSK--PENLI 167
            ..|:|||....:|:..|:            .:|...|.||.             ||.:  .:|:|
Mouse   150 KKFKCCGGEDYRDWSKNQYHDCSAPGPLACGVPYTCCIRNTTDVVNTMCGYKTIDKERLNAQNII 214

  Fly   168 HT-GCR----VEF-ENYWQHLTKIFNILALVLIGFEL 198
            |. ||.    :.| :||        .|:|.:|:|..|
Mouse   215 HVRGCTNAVLIWFMDNY--------TIMAGLLLGILL 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EfNP_523632.2 Tetraspanin 7..209 CDD:459767 59/232 (25%)
Tspan15NP_932113.2 Tetraspanin 20..>157 CDD:459767 37/136 (27%)
penumbra_like_LEL 114..231 CDD:239411 26/117 (22%)

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