DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ef and Tsp33B

DIOPT Version :9

Sequence 1:NP_523632.2 Gene:Tsp42Ef / 35615 FlyBaseID:FBgn0033127 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_523552.1 Gene:Tsp33B / 34590 FlyBaseID:FBgn0032376 Length:326 Species:Drosophila melanogaster


Alignment Length:265 Identity:52/265 - (19%)
Similarity:104/265 - (39%) Gaps:80/265 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SSVKL-IVYALDVLCTLLALVLISFGIYVAVSYNLNEIGQLTAYGYV-GL---GAAALL-----V 59
            :||.| ::...:.:..||.||:.::...|...| |::|.....|||: |:   ||..::     :
  Fly     8 ASVYLHLLLITEAVIGLLILVVTAYYHTVLTGY-LSDIECRLVYGYLFGIYVFGAQVVVTFLCSI 71

  Fly    60 VLWGYLSAWRENVCCTVTFIIFL-------CLVIIAQFAVVYLLI----TQEKTVASNLANALEA 113
            .:|..:  ||..  ||....:.|       |::|.:.|..|:.|.    ..|....::|...::.
  Fly    72 AMWRRI--WRRR--CTPNIRLLLSVWAFYSCVIIASGFGCVWNLYRGVDVLENAADTSLTRGIDM 132

  Fly   114 TWEEELNSPGAMSLYQ--NWF-QCCGRGSPQDYIVNERLPP--------------------ETCF 155
            .:    :.|....|:.  .|. :|||....:|::..|.:|.                    ::||
  Fly   133 YY----SCPEWKLLWDGLQWHKECCGVHGYKDWMNAEWMPRRENNCTSMVLAPFACCKRSCDSCF 193

  Fly   156 RNH----------DKSKP------ENLIHTGCRVEFENYWQHLTKIFN----ILALVLIGFELLL 200
            .|.          :..:|      :::...||...|      ::.::|    ::||.::..:.|:
  Fly   194 NNFLPSEGQSIGGNSRQPFPALTVDSINANGCLPAF------VSAVWNCFYILMALWVLALKFLI 252

  Fly   201 SVISC 205
             |:.|
  Fly   253 -VLCC 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EfNP_523632.2 Tetraspannin 7..211 CDD:278750 51/263 (19%)
tetraspanin_LEL 103..181 CDD:239401 17/116 (15%)
Tsp33BNP_523552.1 Tetraspannin 20..256 CDD:278750 48/251 (19%)
CD151_like_LEL 112..237 CDD:239408 19/134 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449970
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.930

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