DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ef and Tsp29Fa

DIOPT Version :10

Sequence 1:NP_523632.2 Gene:Tsp42Ef / 35615 FlyBaseID:FBgn0033127 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_523515.1 Gene:Tsp29Fa / 34211 FlyBaseID:FBgn0032074 Length:248 Species:Drosophila melanogaster


Alignment Length:257 Identity:50/257 - (19%)
Similarity:93/257 - (36%) Gaps:71/257 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 STSSVKLIVYALDVLCTLLALVLISFGIYVAVSYNLNEIGQLTAYGY---------------VGL 52
            |.::||..::..:::..:..::||:.|..|...|.          ||               :.:
  Fly     7 SANAVKYTLFGFNLIFLITGIILIAVGAGVGAVYT----------GYKLFLAGKFFSIPTFLIVI 61

  Fly    53 GAAALLVVLWGYLSAWRENVCCTVTFIIFLCLVIIAQFAV---VYLLITQEKTVASNL------- 107
            |:..:::..:|...|.:||.|..::|.:.|.::.|.:.|.   .|:|    :..||:|       
  Fly    62 GSFIIIISFFGCWGALKENYCLVLSFSVMLAIIFILELAAGISGYVL----RNDASDLIKTSLTY 122

  Fly   108 ---------ANALEATWEEELNSPGAMSLYQNWFQCCGRGSPQDYIV---NERLPPETC------ 154
                     .||....|::          .|:.|:|||..|..|:|.   |..||...|      
  Fly   123 SLNEYNSINPNATTKLWDD----------IQDEFECCGVTSYNDWITAFPNGDLPISCCNVHVGA 177

  Fly   155 ---FR-NHDKSKPENLIHTGCRVEFENYWQHLTKIFNILALVLIGFELLLSVISCRLCNSIR 212
               |. |:.:|...:....||...|..|............:|:...:....:.:|.:...|:
  Fly   178 VGTFTCNNAQSSVADRHKVGCLDGFSGYISAHAVSLGAAGVVIAILQFFGVIFACYIAREIK 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EfNP_523632.2 Tetraspanin 7..209 CDD:459767 48/248 (19%)
Tsp29FaNP_523515.1 Tetraspanin 11..236 CDD:459767 48/248 (19%)
tetraspanin_LEL 126..201 CDD:351888 20/84 (24%)

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