DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ef and tsp-7

DIOPT Version :9

Sequence 1:NP_523632.2 Gene:Tsp42Ef / 35615 FlyBaseID:FBgn0033127 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_492636.1 Gene:tsp-7 / 192062 WormBaseID:WBGene00006633 Length:232 Species:Caenorhabditis elegans


Alignment Length:224 Identity:52/224 - (23%)
Similarity:91/224 - (40%) Gaps:10/224 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VKLIVYALDVLCTLLALVLISFGIYVAVSYN--LNEIGQ---LTAYGYVGLGAAALLVVLWGYLS 66
            ||.:::..:::..:..|.||..|..:.:.::  |:.:|.   .|....:.:|:...|:...|...
 Worm     9 VKYLLFLANLVLWVGGLSLIIVGSILQLKFDNVLDILGDERLATPILLLVIGSLCTLLGFLGCCG 73

  Fly    67 AWRENVCCTVTFIIFLCLVIIAQFAVVYLLITQEKTVASNLANALEATWEEELNSPGAMSLY--- 128
            |.|||.|.||:|.:.|.|:|..:.|.|.:......:....:.|.|:........|.|..|.:   
 Worm    74 AIRENYCLTVSFAVLLALLITCEIAAVIIGYALHDSFRLGIGNQLQTGMVRYHESRGVESAWDKT 138

  Fly   129 QNWFQCCGRGSPQDYIVNERLPPETCFRNHDKSKPEN--LIHTGCRVEFENYWQHLTKIFNILAL 191
            ...|:|||..:..|::....:|...|....:....||  |...||....|.:......:...:..
 Worm   139 HQLFECCGVTNSSDWLTFTTIPDSCCIEEIEGCARENAPLFEPGCIHSVEQWVLKNGAMVGGICA 203

  Fly   192 VLIGFELLLSVISCRLCNSIRNDARRSYF 220
            ||...:|:....:|.|..||..|....|:
 Worm   204 VLAAIQLVGVCFACCLSKSILKDFHDFYY 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EfNP_523632.2 Tetraspannin 7..211 CDD:278750 48/213 (23%)
tetraspanin_LEL 103..181 CDD:239401 18/82 (22%)
tsp-7NP_492636.1 Tetraspannin 8..223 CDD:278750 48/213 (23%)
NET-5_like_LEL 104..195 CDD:239418 18/90 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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