DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ef and tsp-5

DIOPT Version :10

Sequence 1:NP_523632.2 Gene:Tsp42Ef / 35615 FlyBaseID:FBgn0033127 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_502621.3 Gene:tsp-5 / 192061 WormBaseID:WBGene00006631 Length:241 Species:Caenorhabditis elegans


Alignment Length:232 Identity:48/232 - (20%)
Similarity:92/232 - (39%) Gaps:53/232 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SVKLIVYALDVLCTLLALV-LIS------FGIYVAVSYNLNEIGQLTAYGYVGLGAAALLVVLWG 63
            |:.::::..:|.....:|| |:|      |.:|..:|..:.  |.:...|:.|..|.       |
 Worm    32 SIWMVLHQFEVTVARTSLVNLLSVDNIECFYVYRTISIMIG--GCMVVLGFCGCFAV-------G 87

  Fly    64 YLSAWRENVCCTVTFIIFLCLVIIAQFAVVYLLITQEKTVASNLANALEATWEEEL------NSP 122
            :.|....:|...:.||:|:..::    |:|..|...:     :|.......:.:||      ||.
 Worm    88 FGSKTALSVHLVLVFIVFVVKIV----AIVMFLANND-----HLRREFVGVYRDELVANYHNNSR 143

  Fly   123 GAMSLYQNW----FQCCGRGSPQDYIVNERLP----PETCFRNHDKSKPENLI--HTGCRVEFEN 177
            ...:|  :|    .:|||....:|:     ||    |.:|     :...:|.:  ..||.:....
 Worm   144 TKNTL--DWVHTSLKCCGANGCEDF-----LPAGNFPTSC-----ECGTKNAVVRMEGCALITWA 196

  Fly   178 YWQHLTKIFNILALVLIGFELLLSVISCRLCNSIRND 214
            .::..|.....|.|:.:..||.|.:.:..:.:.||.:
 Worm   197 VFEDGTLQVAFLGLICMLIELGLMIFAAIVIDRIRRE 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EfNP_523632.2 Tetraspanin 7..209 CDD:459767 45/224 (20%)
tsp-5NP_502621.3 Tetraspanin 11..167 CDD:459767 33/159 (21%)
tetraspanin_LEL 116..191 CDD:239401 18/91 (20%)

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