DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ef and tsp-13

DIOPT Version :9

Sequence 1:NP_523632.2 Gene:Tsp42Ef / 35615 FlyBaseID:FBgn0033127 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_741692.1 Gene:tsp-13 / 189737 WormBaseID:WBGene00006639 Length:321 Species:Caenorhabditis elegans


Alignment Length:227 Identity:48/227 - (21%)
Similarity:85/227 - (37%) Gaps:67/227 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VYALDVLCTLLALVLISFGIYV----------------AVSYNLNEIGQLTAYGY--VGLGAAAL 57
            ::..:::..::..:|::.|:::                ||.....|...|.|:.|  :.|||..:
 Worm    61 IFTANIVFLIVGGLLLAMGVWLRTDSRFRNFISERYRQAVQEAFWEAPTLFAFSYIIIVLGAVMM 125

  Fly    58 LVVLWGYLSAWRENVCCTVT-----------FIIFLCLVIIAQFAVVYLLITQEKTVASNLANAL 111
            :|.:.|         ||.:|           .::||.||...... :|||..:: .:...|::||
 Worm   126 VVAMLG---------CCGITGRSRPFLIIYSMVVFLLLVATLSCG-IYLLYKKD-GLDVELSDAL 179

  Fly   112 EATWEEELNSPG----AMSLYQNWFQCCGRGSPQDYIVNERLPPETCFRNHDKSKPENLIHTGCR 172
            ....:.....||    ::...|..|:|||.....|:.|..:..|.:|....|          ||.
 Worm   180 NYMVQHYYQGPGVVQESLDHLQTAFRCCGNAGCSDFRVFRQDIPRSCDIRCD----------GCH 234

  Fly   173 VEFENYWQHLTKIFNILALVLIGFELLLSVIS 204
                         |.|:..:.|||.:.|.|.|
 Worm   235 -------------FRIMIALRIGFSVTLIVFS 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EfNP_523632.2 Tetraspannin 7..211 CDD:278750 48/227 (21%)
tetraspanin_LEL 103..181 CDD:239401 17/81 (21%)
tsp-13NP_741692.1 Tetraspannin 58..269 CDD:278750 48/227 (21%)
tetraspanin_LEL 165..242 CDD:239401 20/100 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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