DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ef and tsp-6

DIOPT Version :10

Sequence 1:NP_523632.2 Gene:Tsp42Ef / 35615 FlyBaseID:FBgn0033127 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_001294830.1 Gene:tsp-6 / 13219712 WormBaseID:WBGene00006632 Length:237 Species:Caenorhabditis elegans


Alignment Length:132 Identity:35/132 - (26%)
Similarity:50/132 - (37%) Gaps:42/132 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 HKAGLVKVVPP--PEWVPRKQGYDIKNINVNIRTPIS-QVASGMQGAY--QQINIQKRAMTVQEF 91
            |.||:...|..  |:|.|..    ||:..:....||| :|....:.||  .|||           
 Worm   541 HVAGVAAYVKSFHPDWTPAA----IKSAIITSAKPISRRVNKDAEFAYGGGQIN----------- 590

  Fly    92 YEKTKEERHATP-KHFDYADIEKKFW-----KNITYVAPIYG-------ADVPG----SLTDPEV 139
                 ..|.|:| ..:|..||....:     .|.|.:||:.|       :.|||    ||..|.:
 Worm   591 -----PRRAASPGLVYDMDDISYVQFLCGEGYNATTLAPLVGTRSVSCSSIVPGLGHDSLNYPTI 650

  Fly   140 KV 141
            ::
 Worm   651 QL 652

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EfNP_523632.2 Tetraspanin 7..209 CDD:459767 35/132 (27%)
tsp-6NP_001294830.1 Tetraspanin 10..227 CDD:459767
Blue background indicates that the domain is not in the aligned region.

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