DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ef and Tspan9

DIOPT Version :10

Sequence 1:NP_523632.2 Gene:Tsp42Ef / 35615 FlyBaseID:FBgn0033127 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_001366065.1 Gene:Tspan9 / 109246 MGIID:1924558 Length:330 Species:Mus musculus


Alignment Length:233 Identity:45/233 - (19%)
Similarity:94/233 - (40%) Gaps:27/233 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VKLIVYALDVLCTLLALVLISFGIYVAVSYNLNEIGQLTAY--GYVGLGAAALLVVL-------- 61
            :|..::..:::..|....|:..||:::||.     |....:  .:..|.||.|::.:        
Mouse   100 LKYTMFLFNLIFWLCGCGLLGVGIWLSVSQ-----GNFATFSPSFPSLSAANLVIAIGTIVMVTG 159

  Fly    62 -WGYLSAWRENVCCTVTFIIFLCLVIIAQFAVVYLLITQEKTVASNLANALEA-----TWEEELN 120
             .|.|.|.:||.|..::|.|.|.::::|:..::.|.......|..|....|:.     ..|..:.
Mouse   160 FLGCLGAIKENKCLLLSFFIVLLIILLAELILIILFFVYMDKVNENAKQDLKEGLLLYNTENNVG 224

  Fly   121 SPGAMSLYQNWFQCCGRGSPQDY--IVNERLPPETCFRNHDKSKPEN----LIHTGCRVEFENYW 179
            ...|.::.|...:|||.....|:  ::.|...|:.|...:.:....|    |..|||..:.:.::
Mouse   225 LKNAWNIIQAEMRCCGVTDYTDWYPVLGENTVPDRCCMENSQGCGRNSTTPLWRTGCYEKVKLWF 289

  Fly   180 QHLTKIFNILALVLIGFELLLSVISCRLCNSIRNDARR 217
            .....:...:.:.::..::|....|..|...|....::
Mouse   290 DDNKHVLGTVGMCILIMQILGMAFSMTLFQHIHRTGKK 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EfNP_523632.2 Tetraspanin 7..209 CDD:459767 44/223 (20%)
Tspan9NP_001366065.1 Tetraspanin 100..319 CDD:459767 44/223 (20%)
NET-5_like_LEL 196..293 CDD:239418 18/96 (19%)

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