DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ef and tspan15

DIOPT Version :10

Sequence 1:NP_523632.2 Gene:Tsp42Ef / 35615 FlyBaseID:FBgn0033127 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_001017773.1 Gene:tspan15 / 100000710 ZFINID:ZDB-GENE-050417-295 Length:296 Species:Danio rerio


Alignment Length:230 Identity:53/230 - (23%)
Similarity:89/230 - (38%) Gaps:50/230 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LIVYALDVLCTLLALVLISFGIYVAVS----YNLNEIGQLTAYGYVGLGAAALLVVLWGYLSAWR 69
            ||.||  .:..|:...:::.|||..|.    ..|..:....|...:.||....:|...|.|::.|
Zfish    20 LIGYA--TIFWLIGGFILAIGIYAEVERQRYKTLEGVFLAPAIILIVLGIIMFIVSFIGVLASLR 82

  Fly    70 ENVCCTVTFI--IFLCLVIIAQFAVVYLLITQE------KTVASNLANALEATWEEELNSPGAMS 126
            :|:|....|:  :.||||:.....:|.|:...:      |.:...:.|     :.::|:....|.
Zfish    83 DNLCLLKVFLYMLALCLVLELVGGIVALIFKNQTVDILNKNIRKGMVN-----YYDDLDFKNIMD 142

  Fly   127 LYQNWFQCCGRGSPQDYIVN-----------ERLPPETC--------------FRNHDKSKPEN- 165
            ..|..|:|||....||:.||           ....|.||              ::..:|.:.|| 
Zfish   143 FVQKTFKCCGGTEYQDWEVNMYHNCSAPGPLACAAPYTCCIVTPGEVVNTMCGYKTLNKDRHENT 207

  Fly   166 --LIHTGCRVEFENYWQHLTKIFNILALVLIGFEL 198
              :...|| .:....|  |...:..:|.:|:|..|
Zfish   208 DVIYIRGC-TDAVFIW--LIDNYKTMAGLLLGIFL 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EfNP_523632.2 Tetraspanin 7..209 CDD:459767 53/230 (23%)
tspan15NP_001017773.1 Tetraspanin 16..>153 CDD:459767 34/139 (24%)
penumbra_like_LEL 110..227 CDD:239411 24/124 (19%)

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