DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ee and Cd82

DIOPT Version :10

Sequence 1:NP_523631.1 Gene:Tsp42Ee / 35614 FlyBaseID:FBgn0029506 Length:228 Species:Drosophila melanogaster
Sequence 2:NP_113985.2 Gene:Cd82 / 83628 RGDID:69070 Length:266 Species:Rattus norvegicus


Alignment Length:257 Identity:67/257 - (26%)
Similarity:110/257 - (42%) Gaps:49/257 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 MVKYILFIFNTIVSVIGILGIVYGVLIL--KS--IGVVEVNG---QVGFPIQALMPIILISLGSI 64
            :.||.||:||.:..::|.:.:.:||.||  ||  |.|::.:.   |||       ..:.|.:|:|
  Rat     8 VTKYFLFLFNLLFFILGAVILGFGVWILADKSSFISVLQTSSSSLQVG-------AYVFIGVGAI 65

  Fly    65 VVFISFLGCCGAIRESVCMTMSYATFLLILLILQLTFVVLLFTHREEFENAMGN----VIENAWN 125
            .:.:.||||.||:.|..|:...|..|||::||.|:|..||.:.:.::.:..|||    :|:|...
  Rat    66 TMLMGFLGCIGAVNEVRCLLGLYFVFLLLILIAQVTVGVLFYFNADKLKQEMGNTVMDIIQNYSV 130

  Fly   126 SEHTYKGGVFDTIQKSLHCCGSSSALDYIGKGDL-------VPPSC----------------CSG 167
            :..:.:...:|.:|..:.|||..|..::.....|       .|.||                |..
  Rat   131 NASSSREEAWDYVQAQVKCCGWVSPSNWTRNPVLKNSTKTTYPCSCEKTKEEDNQLIVKKGFCES 195

  Fly   168 SCLIPTNYYP--------GCRGKFVELMTTGSDNAKYVGIGLIGIELIGFIFACCLANNVRN 221
            .....:...|        ||..|....:.........|..|:..|||:|...:.||...:.:
  Rat   196 DNSTASENSPEDWPVHPEGCMEKAQAWLQENFGILLGVCAGVAVIELLGLFLSICLCRYIHS 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EeNP_523631.1 Tetraspanin 8..217 CDD:459767 67/250 (27%)
Cd82NP_113985.2 Tetraspanin 24..253 CDD:459767 61/235 (26%)
CD37_CD82_like_LEL 106..228 CDD:239413 20/121 (17%)

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