DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ee and upk1b

DIOPT Version :10

Sequence 1:NP_523631.1 Gene:Tsp42Ee / 35614 FlyBaseID:FBgn0029506 Length:228 Species:Drosophila melanogaster
Sequence 2:NP_001037968.1 Gene:upk1b / 733741 XenbaseID:XB-GENE-988025 Length:259 Species:Xenopus tropicalis


Alignment Length:266 Identity:50/266 - (18%)
Similarity:93/266 - (34%) Gaps:82/266 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DCGTSMVKYILFIFNTIVSVIGILGIVYGVLILKSIGVVEVNGQVG-FP-IQALMPIILISLGSI 64
            |.|....:.|: ||..:  |:|:.|:.     |.:..:..|:.|.| :| ::|.....:.:...|
 Frog     4 DSGVRCYQSII-IFGNV--VLGLCGVA-----LTAECIFFVSDQSGIYPLLEATNNADIFAAAWI 60

  Fly    65 VVF-------ISFLGCCGAIRESVCMTMSYATFLLILLILQLTFVVLLFTHREEFENAMGNVI-- 120
            .:|       :|.:|..|.::.:..|.|.|...:.::...::...:...|....|   :.|:.  
 Frog    61 GIFTGFCFFILSIVGIIGIMKSNRRMLMVYLILMFVVYAFEVASAITAATQENFF---IPNLFLK 122

  Fly   121 --------ENAWNSEHTYK-GGVFDTIQKSL---HCCG------------------SSSALDYIG 155
                    .|..|:::.:| .||.:|..:.:   .|||                  |.||..:  
 Frog   123 QMLDFYQNPNPTNNDNLWKINGVTNTWNRFMLLNGCCGVNGPQDWQTYTSVFRQSNSDSAYPW-- 185

  Fly   156 KGDLVPPSCCS----------GSCLIPTNYY---PGCRGKFVELMTTGSDNAKYVGIGLIGIELI 207
                 |..||:          .:|.:..:.|   .||..:....||..:          .|:...
 Frog   186 -----PQQCCAMNSLGQPVNLDACKLGVSPYVNLNGCYDQMAGPMTRHA----------WGVAWF 235

  Fly   208 GFIFAC 213
            ||...|
 Frog   236 GFSILC 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EeNP_523631.1 Tetraspanin 8..217 CDD:459767 48/260 (18%)
upk1bNP_001037968.1 Tetraspanin 13..>160 CDD:459767 30/157 (19%)
uroplakin_I_like_LEL 117..229 CDD:239409 22/118 (19%)

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