DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ee and Tspan4

DIOPT Version :10

Sequence 1:NP_523631.1 Gene:Tsp42Ee / 35614 FlyBaseID:FBgn0029506 Length:228 Species:Drosophila melanogaster
Sequence 2:NP_001390287.1 Gene:Tspan4 / 64540 MGIID:1928097 Length:333 Species:Mus musculus


Alignment Length:233 Identity:63/233 - (27%)
Similarity:111/233 - (47%) Gaps:46/233 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VKYILFIFNTI--VSVIGILGIVYGVLILKSIGVVEVNGQVGFPIQALMPIILISLGSIVVFISF 70
            |||::|.||.:  :...|:||:  |:.:..:.|....... .||..:...::::: |:.|:.|.|
Mouse   104 VKYLMFAFNLLFWLGGCGVLGV--GIWLAATQGNFATLSS-SFPSLSAANLLIVT-GTFVMAIGF 164

  Fly    71 LGCCGAIRESVCMTMSYATFLLILLILQLTFVVLLFTHREEFEN--------------AMGNV-I 120
            :||.||::|:.|:.:::...||::.:|:.|..||.|.:.::.::              ..||| :
Mouse   165 VGCIGALKENKCLLLTFFVLLLLVFLLEATIAVLFFAYSDKIDSYAQQDLKKGLHLYGTQGNVGL 229

  Fly   121 ENAWNSEHTYKGGVFDTIQKSLHCCGSSSALDY--IGKGDLVPPSCC---SGSCLIPTNYYPGCR 180
            .|||:           .||....|||.|:..|:  :.....||.|||   |.||.:   :.||..
Mouse   230 TNAWS-----------IIQTDFRCCGVSNYTDWFEVYNATRVPDSCCLEFSDSCGL---HEPGTW 280

  Fly   181 GK---FVELMTTGSDNAKYVGI-GLIG--IELIGFIFA 212
            .|   :..:.....:|...||| ||..  ::::|..||
Mouse   281 WKSPCYETVKAWLQENLLAVGIFGLCTALVQILGLTFA 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EeNP_523631.1 Tetraspanin 8..217 CDD:459767 63/233 (27%)
Tspan4NP_001390287.1 Tetraspanin 104..323 CDD:459767 63/233 (27%)
NET-5_like_LEL 200..297 CDD:239418 25/110 (23%)

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