DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ee and cd9b

DIOPT Version :9

Sequence 1:NP_001260753.1 Gene:Tsp42Ee / 35614 FlyBaseID:FBgn0029506 Length:228 Species:Drosophila melanogaster
Sequence 2:XP_005164541.1 Gene:cd9b / 406737 ZFINID:ZDB-GENE-040426-2768 Length:231 Species:Danio rerio


Alignment Length:236 Identity:62/236 - (26%)
Similarity:107/236 - (45%) Gaps:28/236 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDCGTSMVKYILFIFNTIVSVIGILGIVYGVLI-----LKSIGVVEVNGQVGFPIQALMPI-ILI 59
            :..|...:|||:|.||.::.:.|...:..|:.:     .|.....| |||..|    |..: |||
Zfish     7 LSSGEQCIKYIIFFFNFMLWLAGTGVLAVGLWLRFDAKTKEFFTAE-NGQTVF----LTGVYILI 66

  Fly    60 SLGSIVVFISFLGCCGAIRESVCMTMSYATFLLILLILQLTFVVLLFTHREEFENAMGN-VIENA 123
            ..|::::.:.||||||||:||.||...:..|||::...::...:...:::::..:.:.. ..:..
Zfish    67 VAGAVMMVVGFLGCCGAIKESACMLGLFFMFLLVIFAAEVAAGIWGLSNKDKIVSDIQQFYTQTV 131

  Fly   124 WNSEHTYKGGVFDT---IQKSLHCCGSSSALDYIGKGDLVPPSC--CSGSCLIPTNYYPGCRGKF 183
            .|.:.:..|.:.:|   |..||.|||.:..:.     |.|..:|  ..|...:.|.   ||....
Zfish   132 KNYKESPDGPLKETLTAIHFSLQCCGPTGLVT-----DGVSVTCPKQEGLANVITT---GCSSVI 188

  Fly   184 VELMTTGSDNAKYVGIGLIGIELIGFIFA---CCLANNVRN 221
            .::..:.......||||:..|.:.|.||:   ||.....|:
Zfish   189 QDMFNSRLHVIGGVGIGIGVIMVFGMIFSMLLCCAIRRTRD 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EeNP_001260753.1 Tetraspannin 8..219 CDD:278750 60/225 (27%)
tetraspanin_LEL 106..187 CDD:239401 16/86 (19%)
cd9bXP_005164541.1 Tetraspannin 13..224 CDD:278750 60/223 (27%)
CD9_LEL 113..196 CDD:239405 16/90 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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