DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ee and Tsp42Ej

DIOPT Version :9

Sequence 1:NP_001260753.1 Gene:Tsp42Ee / 35614 FlyBaseID:FBgn0029506 Length:228 Species:Drosophila melanogaster
Sequence 2:NP_523636.1 Gene:Tsp42Ej / 35620 FlyBaseID:FBgn0033132 Length:227 Species:Drosophila melanogaster


Alignment Length:228 Identity:55/228 - (24%)
Similarity:87/228 - (38%) Gaps:35/228 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KYILFIFNTIVSVIGILGIVYGVLILKSIGVVEVNGQVGFPIQALMPIILISLGSIVVFISFLGC 73
            ||.|.:...::....:.....||....|  .|.|.|..|..:          .|..|..::|||.
  Fly    11 KYGLLVTCILIVTCNVFFFSCGVTTWGS--AVSVYGSYGSAL----------CGGAVFGVAFLGM 63

  Fly    74 CGAIRESVCMTMSYATFLLI---LLILQLTFVVLLFTHREE-----FENAMGNVIENAWNSEHTY 130
            ..|::    ::..|:.:.||   |:|..|...:..||...|     ||..|.::.|     ..|:
  Fly    64 YVALK----VSYKYSIYYLICSGLVIAALGSYLFTFTAMREQLMGRFEERMRDLFE-----RKTH 119

  Fly   131 KGGVFDTIQKSLHCCGSSSALDYIGK--GDLVPPSCC-SGSCLIPTNYY-PGCRGKFVELMTTGS 191
            .......:.....|||.....||:.:  |.| |.||| :..|..|.:.| .||..|.|..:...:
  Fly   120 SDDKMQPVHSLFGCCGIEGPQDYLQEEHGAL-PSSCCYAFDCSKPAHVYEEGCSTKAVATLRMQA 183

  Fly   192 DNAKYVGIGLIGIELIGFIFACCLANNVRNYKR 224
            :...|..:.:|.:|.:| :|........|.|.:
  Fly   184 ELNYYSCMAIIALEFLG-LFTAYHLGKARKYAK 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EeNP_001260753.1 Tetraspannin 8..219 CDD:278750 53/221 (24%)
tetraspanin_LEL 106..187 CDD:239401 26/89 (29%)
Tsp42EjNP_523636.1 Tetraspannin 11..211 CDD:278750 53/222 (24%)
tetraspanin_LEL 97..183 CDD:239401 24/91 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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