DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp42Ee and Tsp42Eg

DIOPT Version :9

Sequence 1:NP_001260753.1 Gene:Tsp42Ee / 35614 FlyBaseID:FBgn0029506 Length:228 Species:Drosophila melanogaster
Sequence 2:NP_523633.1 Gene:Tsp42Eg / 35616 FlyBaseID:FBgn0033128 Length:218 Species:Drosophila melanogaster


Alignment Length:232 Identity:63/232 - (27%)
Similarity:108/232 - (46%) Gaps:21/232 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDCGTSMVKYILFIFNTIVSVIGILGIVYGVLILKSIGVVEVNGQVGFPIQALMPIILISLGSIV 65
            |.|.|:::|.....::.|:::.|::.|..||.|:...   |......|        ::|::|.:|
  Fly     1 MACSTNVLKGFALFWDIILALFGLVVIGLGVHIIYKF---EHFNTAAF--------VIIAVGVVV 54

  Fly    66 VFISFLGCCGAIRESVCMTMSYATFLLILLILQLTFVVLLFTHREEFENAMGNVIENAWNSEHT- 129
            |..:..|..||.|||...:..:...|::|:||::..|..|:..:......:....:..||.:.. 
  Fly    55 VLTALFGALGAARESSATSKVFVVILIVLVILEVLAVGFLWVFQTSLLINVDKTFDKLWNDQPVP 119

  Fly   130 YKGG---VFDTIQKSLHCCGSSSALDYIGKGDLVPPSCCSGSCLIPTNYYPGCRGKFVELMTTGS 191
            .|.|   ...::::.|.|||:....|||    |.|.||.:|..  ......|||.||::.:....
  Fly   120 IKPGNQSQIASLERWLDCCGNVGPSDYI----LPPNSCYNGES--DKLNLEGCRQKFLDFIADRW 178

  Fly   192 DNAKYVGIGLIGIELIGFIFACCLANNVRNYKRRNAY 228
            .....|.:.|:|:|||..:.|..|||::.|..||:.|
  Fly   179 TTFNLVSLVLLGVELICALLAYVLANSIVNRWRRSKY 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EeNP_001260753.1 Tetraspannin 8..219 CDD:278750 56/214 (26%)
tetraspanin_LEL 106..187 CDD:239401 21/84 (25%)
Tsp42EgNP_523633.1 Tetraspannin 17..202 CDD:395265 52/201 (26%)
tetraspanin_LEL 95..176 CDD:239401 21/86 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443017
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001737
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.840

Return to query results.
Submit another query.