DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ee and Tsp39D

DIOPT Version :9

Sequence 1:NP_001260753.1 Gene:Tsp42Ee / 35614 FlyBaseID:FBgn0029506 Length:228 Species:Drosophila melanogaster
Sequence 2:NP_523612.3 Gene:Tsp39D / 35405 FlyBaseID:FBgn0032943 Length:235 Species:Drosophila melanogaster


Alignment Length:245 Identity:67/245 - (27%)
Similarity:122/245 - (49%) Gaps:43/245 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GTSMVKYILFIFNTIVSVIGILGIVYGVLILKSIGVVEVN-----GQVGFPIQALMPIILISLGS 63
            |.:.|||:.|..|.:.::.|:|..:.|       |:|::|     ..|...:.. .||||:.:|:
  Fly     5 GLTCVKYLTFFCNLLFALTGLLIFLVG-------GMVQLNYAHYSNFVSDHVWT-APIILMIVGA 61

  Fly    64 IVVFISFLGCCGAIRESVCMTMSYATFLLILLILQLTFVVLLFTHREEFENAMGNVIENAWNS-- 126
            .|..|.|||||||::||.||.:|:|...:::.:.::...:..:..    ...:..::|:.:||  
  Fly    62 AVAVICFLGCCGALKESSCMILSFALLAVVIFLFEIGLGLAGYVK----HTGLHQIMESQFNSTM 122

  Fly   127 EHTYK-----GGVFDTIQKSLHCCGSSSALDY--IGKGDLVPPSCCS-------GSCLIPTNYYP 177
            :| ||     ...:..:|..|.|||.:...|:  :.:...:|.:|||       ..|   ||.:.
  Fly   123 QH-YKERADYRDAWTLLQTELDCCGINGPNDWETVYRNSTLPAACCSVINLSEAKEC---TNTHA 183

  Fly   178 ---GCRGKFVELMTTGSDNAKYVGIGLIGIELIGFIFACCLANNVRNYKR 224
               ||..|.:|::.:.:.....|.:|:.||:::..:|||||   .|:::|
  Fly   184 TQHGCLQKLLEILDSKTLILASVVLGVAGIQMLTILFACCL---YRSFRR 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EeNP_001260753.1 Tetraspannin 8..219 CDD:278750 64/234 (27%)
tetraspanin_LEL 106..187 CDD:239401 23/99 (23%)
Tsp39DNP_523612.3 Tetraspannin 8..227 CDD:278750 64/237 (27%)
tetraspanin_LEL 104..200 CDD:239401 23/103 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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