DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ee and Tsp29Fb

DIOPT Version :9

Sequence 1:NP_001260753.1 Gene:Tsp42Ee / 35614 FlyBaseID:FBgn0029506 Length:228 Species:Drosophila melanogaster
Sequence 2:NP_001137809.1 Gene:Tsp29Fb / 34212 FlyBaseID:FBgn0032075 Length:308 Species:Drosophila melanogaster


Alignment Length:258 Identity:62/258 - (24%)
Similarity:112/258 - (43%) Gaps:50/258 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDCGTSMVKYILFIFNTIVSVIGILGIVYGVLILKSIG--VVEVNGQVGFPIQALMPIILISLGS 63
            ::.|....||:|.|.:.:.::..||.|:.|..|....|  .:.::|....|     |.:||::|.
  Fly     8 LNSGMKCAKYMLIIVSFMFALTAILLIMVGTTIQTIFGDFSLFIDGHFSSP-----PALLIAIGF 67

  Fly    64 IVVFISFLGCCGAIRESVCMTMSYATFLLILLILQLTFVVLLFTHREEFENAMGNVIENA---WN 125
            |::.::.||..||::|||.:...|...|.::.||:::..:..|..:.:....:...:..|   :.
  Fly    68 ILIAVAALGAYGAVKESVMVINLYGVCLFLVFILEVSAAIAAFVMQSQVRGMLIRTMNQALAEYE 132

  Fly   126 SEHTYKGGVFDTIQKSLHCCGSSSALDY-----------IGKGDLVPPSCCSG------------ 167
            .:...:.|| |.:|..|.|||.:...|:           :|..|:|.|:.|.|            
  Fly   133 HDPYVESGV-DFMQSMLECCGVNEPEDWKDYLSANVNFTLGVDDVVVPNSCCGNQPTSLNDSTQM 196

  Fly   168 SCLIPTNYYPGCRGKF-------VELMTTGSDNAKYVGIGLIGIELIGFIFACCLANNVRNYK 223
            :|:...:|  ||..|.       ..|:.||:....:|       :|:|.:.|..||..:|..|
  Fly   197 TCMETYDY--GCFRKMNFIVSQSAMLIATGATTVAFV-------QLLGVLCAFMLAKTLRRNK 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EeNP_001260753.1 Tetraspannin 8..219 CDD:278750 59/245 (24%)
tetraspanin_LEL 106..187 CDD:239401 22/113 (19%)
Tsp29FbNP_001137809.1 Tetraspannin 14..246 CDD:278750 59/246 (24%)
tetraspanin_LEL 110..218 CDD:239401 22/110 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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