DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ee and Tsp26A

DIOPT Version :9

Sequence 1:NP_001260753.1 Gene:Tsp42Ee / 35614 FlyBaseID:FBgn0029506 Length:228 Species:Drosophila melanogaster
Sequence 2:NP_001097093.1 Gene:Tsp26A / 33838 FlyBaseID:FBgn0031760 Length:314 Species:Drosophila melanogaster


Alignment Length:189 Identity:50/189 - (26%)
Similarity:81/189 - (42%) Gaps:44/189 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VKYILFIFNTIVSVIGILGIVYGVLILKSIGVVEVNGQVGFPIQALMP-IILISLGSIVVFISFL 71
            :||:||..|.|:.:..:|.:..|:......|:.....::.|  .||.| .:||.||.:...:.|:
  Fly    19 LKYLLFASNVILWLSALLVLSVGIWAWSEKGMFRNIARLHF--IALDPAFVLIILGGVTFLLGFM 81

  Fly    72 GCCGAIRESVCMTMSYATFLLILLILQLTFVVLLFTHREEFENAMGNVIENAWNSEHTYKG---- 132
            |..||:||:.|:..:||.||.:|||.::.|..:.|..:::           .|..:...:|    
  Fly    82 GSVGALRENTCLLGAYAIFLSVLLIAEIGFCAVAFVLKDK-----------GWIKDQATEGLKAF 135

  Fly   133 -----------GVFDTIQKS-LHCCGSSSALDY------------IGKGDL--VPPSCC 165
                       .:.|.||:. |.|||.....|:            ||..:.  ||.|||
  Fly   136 IRHYREDADQQNLIDWIQEDWLQCCGIDGPKDWDSNNYFNCSSIAIGSREACGVPFSCC 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EeNP_001260753.1 Tetraspannin 8..219 CDD:278750 50/189 (26%)
tetraspanin_LEL 106..187 CDD:239401 18/90 (20%)
Tsp26ANP_001097093.1 Tetraspannin 18..253 CDD:278750 50/189 (26%)
DUF2207 <65..157 CDD:303056 25/102 (25%)
TM4SF9_like_LEL 118..239 CDD:239412 17/88 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442903
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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