DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ee and cd9a

DIOPT Version :9

Sequence 1:NP_001260753.1 Gene:Tsp42Ee / 35614 FlyBaseID:FBgn0029506 Length:228 Species:Drosophila melanogaster
Sequence 2:XP_005159038.1 Gene:cd9a / 322455 ZFINID:ZDB-GENE-030131-1175 Length:228 Species:Danio rerio


Alignment Length:254 Identity:64/254 - (25%)
Similarity:105/254 - (41%) Gaps:72/254 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GTSMVKYILFIFNTIVSVIGILGIVYGVLI-----LKSIGVVEVNGQVGFPIQALMPIILISLGS 63
            |...|||::|:||.|..:.|...:..|:.:     .||:...|.:..|.:    ....|||:.|:
Zfish     7 GEMCVKYLMFVFNFIFWIAGTAVLAVGLWLRFDPKTKSLFEGENSPYVFY----TGVYILIAAGA 67

  Fly    64 IVVFISFLGCCGAIRESVCMTMSYATFLLILLILQLTFVVLLFTHREEFENAMGNVIENAWNSEH 128
            :::.:.|.||||||:||.||...:..|||::..:::...:..|:::.:       |.|:.    .
Zfish    68 LMMVVGFFGCCGAIQESPCMLGLFFFFLLVIFAVEVAAGIWGFSNQTK-------VTEDI----T 121

  Fly   129 TYKGGVFDTIQKS---------------LHCCGSS----SALDYI-----GKGDLVPPSCCSGSC 169
            |:....:||.|:|               |:|||.|    .:||..     |..:|:..||     
Zfish   122 TFYRQTYDTYQQSKQEALKKTLRLFQHGLNCCGPSGNMQESLDETCPKKEGLDNLIIKSC----- 181

  Fly   170 LIPTNYYPGCRGKFVELMTTGSDNAKYVGIGLIGIE-----LIGFIFA---CCLANNVR 220
                   |....:..        |:|...||.:||.     :.|.||:   ||.....|
Zfish   182 -------PDAIDEVF--------NSKLHIIGGVGIATGVIMIFGMIFSMMLCCAIRKTR 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EeNP_001260753.1 Tetraspannin 8..219 CDD:278750 62/247 (25%)
tetraspanin_LEL 106..187 CDD:239401 20/104 (19%)
cd9aXP_005159038.1 Tetraspannin 10..221 CDD:278750 62/245 (25%)
CD9_LEL 110..193 CDD:239405 21/113 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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