DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ee and Tsp3A

DIOPT Version :10

Sequence 1:NP_523631.1 Gene:Tsp42Ee / 35614 FlyBaseID:FBgn0029506 Length:228 Species:Drosophila melanogaster
Sequence 2:NP_525054.2 Gene:Tsp3A / 31244 FlyBaseID:FBgn0040334 Length:304 Species:Drosophila melanogaster


Alignment Length:279 Identity:62/279 - (22%)
Similarity:110/279 - (39%) Gaps:81/279 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VKYILFIFNTIVSVIGILGIVYGVLILKSIGVV-------EVNGQVG----FPIQALMPIILISL 61
            |||::|:.|.:..:.|  |::.|      |||.       :.||.|.    :.:...:.:::|..
  Fly    43 VKYMIFLLNFVFWLFG--GLLLG------IGVYAFRDKWEDANGSVRLENFYDVFLNISLVMILA 99

  Fly    62 GSIVVFISFLGCCGAIRESVCMTMSYATFLLILLILQLTFVVLLFTHREEFENAMGNVIENAWNS 126
            |:::..:||.||.||:||:..:...|:..||:..:|::...::.|.    ....|...:|..:..
  Fly   100 GTVIFLVSFSGCVGALRENTFLLKFYSMCLLLFFLLEMAIAIVCFV----CPQYMNTFLEKQFTH 160

  Fly   127 E--HTYKG-----GVFDTIQKSLHCCG-----------------SSSALDYIGKGDLVPPSCC-- 165
            :  |:|:.     ...|..|:...|||                 ||.:::..|    ||.|||  
  Fly   161 KIIHSYRDDPDLQNFIDFAQQEFKCCGLSNSGYQDWSKNEYFNCSSPSVEKCG----VPYSCCIN 221

  Fly   166 -----SGSCLIPTNY---------------YPGCRGKFVELMTTGSDNAKYV----GIGLIGIEL 206
                 ||...|...|               ..||    :|::...:::..||    .:|:..|:|
  Fly   222 ATDISSGLVNIMCGYGVQNAPVPEATKLIWTSGC----IEIVRVWAEHNLYVIAGNALGIALIQL 282

  Fly   207 IGFIFACCLANNVRNYKRR 225
            :....|..|...:...|.|
  Fly   283 LVIYLAKTLEGQIELQKSR 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EeNP_523631.1 Tetraspanin 8..217 CDD:459767 60/269 (22%)
Tsp3ANP_525054.2 Tetraspanin 43..>187 CDD:459767 36/155 (23%)
penumbra_like_LEL 144..267 CDD:239411 25/134 (19%)

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