Protein Alignment Tsp42Ee and Tspan17

DIOPT Version :10

• Sequence 1: NP_523631.1
• Gene: Tsp42Ee / 35614
• FlyBaseID: FBgn0029506
• Length: 228
• Species: Drosophila melanogaster
• Sequence 2: XP_006253692.1
• Gene: Tspan17 / 306771
• RGDID: 1311167
• Length: 281
• Species: Rattus norvegicus
• Alignment Length: 268
• Identity: 69/268 - (25%)
• Similarity: 109/268 - (40%)
• Gaps: 75/268 - (27%)

  Fly     3 CGTSMVKYILFIFNTIVSVIGILGIVYGVL------ILKSI-GVVEVNGQVGFPIQALMPI-ILI 59
            ||    ||.||.||.:..|:|.|.:..|:.      :|.:| |:.::.|        |.|: :.:
  Rat    16 CG----KYFLFGFNIVFWVLGALFLAIGLWAWGEKGVLSNISGLTDLGG--------LDPVWLFV 68

  Fly    60 SLGSIVVFISFLGCCGAIRESVCMTMSYATFLLILLILQLTFVVLLFTHREEFENAMGNVIENAW 124
            .:|.|:..:.|.||.||:||:..:...::.||.::..|:|...:|.|..::...:.: |:..|
  Rat    69 VIGGIMSVLGFAGCIGALRENTFLLKFFSVFLGLIFFLELAAGILAFVFKDWIRDQL-NLFIN-- 130

  Fly   125 NSEHTYKGGV-----FDTIQKSLHCCGSSSALD-----YIGKGDL--------VPPSCC------ 165
            |:...|:..:     .|..|:...|||:....|     |....||        ||.|||
  Rat   131 NNVKAYRDDIDLQNLIDFAQEYWSCCGARGPNDWNLNIYFNCTDLNPSRERCGVPFSCCVRDPAE 195

  Fly   166 -------------------SGSCLIPTNYYPGCRGKFVELMTTGSDNAKYVGIGLIGIELIGFIF 211
                               .||.     |..||.|:|.:.:   .||...|...|:.|.|:. |.
  Rat   196 DVLNTQCGYDIRLKLELEQQGSI-----YTKGCVGQFEKWL---QDNLIVVAGVLVAIALLQ-IC 251

  Fly   212 ACCLANNV 219
            ..|||.|:
  Rat   252 GICLAQNL 259

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Tsp42Ee	NP_523631.1	Tetraspanin	8..217	CDD:459767	65/259 (25%)
Tspan17	XP_006253692.1	Tetraspanin	18..260	CDD:459767	67/262 (26%)
		TM4SF9_like_LEL	115..235	CDD:239412	27/130 (21%)