DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ee and Tspan12

DIOPT Version :10

Sequence 1:NP_523631.1 Gene:Tsp42Ee / 35614 FlyBaseID:FBgn0029506 Length:228 Species:Drosophila melanogaster
Sequence 2:NP_766595.1 Gene:Tspan12 / 269831 MGIID:1889818 Length:305 Species:Mus musculus


Alignment Length:174 Identity:41/174 - (23%)
Similarity:71/174 - (40%) Gaps:37/174 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 AGEIPDISKAKQSRGEKKARKIMSKLGLKPVQGVNRVTIRKSKNIL-----------FVINNPDV 105
            |.::.||.:|          .|.::|.:....|||::...:.||||           .:|.|.::
Mouse   436 AEDLRDIQEA----------IIDAQLDVLKANGVNKLNEEQLKNILKHFKALRKNQGNIIANLNM 490

  Fly   106 YK---NPHSDTYIIFGEAKIEDLTQQAQVAAAEKFKAPEATPAAGEASSSTNVVTPIAEEDEEEV 167
            .:   ...||...:..|.| |::|..|.:....|:...........|::...||.. |||..:|:
Mouse   491 ARGTLKDASDIQEMMDELK-ENMTHLAALIDGAKYNLEAKLELLSNATAKQEVVRQ-AEEHAQEL 553

  Fly   168 DDTGIDDKDIDLVMSQANVKRAKAI-RALKNNENDIVNAIMELT 210
            ....     |||.|...|:|.:.|: :|:     :.:||...:|
Mouse   554 TKLA-----IDLQMVIMNIKNSTAVHKAI-----EAINAFTAIT 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EeNP_523631.1 Tetraspanin 8..217 CDD:459767 41/174 (24%)
Tspan12NP_766595.1 Tetraspanin 10..246 CDD:459767
TM4SF12_like_LEL 116..218 CDD:239410
Blue background indicates that the domain is not in the aligned region.

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