DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ee and Cd81

DIOPT Version :9

Sequence 1:NP_001260753.1 Gene:Tsp42Ee / 35614 FlyBaseID:FBgn0029506 Length:228 Species:Drosophila melanogaster
Sequence 2:NP_037219.2 Gene:Cd81 / 25621 RGDID:2315 Length:236 Species:Rattus norvegicus


Alignment Length:244 Identity:65/244 - (26%)
Similarity:119/244 - (48%) Gaps:45/244 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TSMVKYILFIFNTIVSVIGILGIVYGVLI-------LKSIGVVEVNGQVGFPIQALMPI-ILISL 61
            |..:||:||:||.:..:.|  |::.||.:       ..|:..:|: |....|....:.| |||::
  Rat     7 TKCIKYLLFVFNFVFWLAG--GVILGVALWLRHDPQTTSLLYLEL-GDKPAPSTFYVGIYILIAV 68

  Fly    62 GSIVVFISFLGCCGAIRESVCMTMSYATFLLILLILQLTFVVLLFTHREE--------FENAMGN 118
            |::::|:.||||.|||:||.|:..::.|.|:||...::...:..|.::::        ::.|:..
  Rat    69 GAVMMFVGFLGCYGAIQESQCLLGTFFTCLVILFACEVAAGIWGFVNKDQIAKDVKQFYDQALQQ 133

  Fly   119 VI--ENAWNSEHTYKGGVFDTIQKSLHCCGSSSALDY---IGKGDLVPPSCCSGSCLIPTNYYPG 178
            .:  ::|.|::     .|..|..::|:||||::....   :.:..|.|.|..|.:.|:..:    
  Rat   134 AVMDDDANNAK-----AVVKTFHETLNCCGSNTLTTLTTTVLRNSLCPSSSNSFTQLLKED---- 189

  Fly   179 CRGKFVELMTTGSDNAKYVGIGLIGI------ELIGFIFACCLANNVRN 221
            |..|..||.   |.....:||..|.:      |:|..:..||   .:||
  Rat   190 CHQKIDELF---SGKLYLIGIAAIVVAVIMIFEMILSMVLCC---GIRN 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EeNP_001260753.1 Tetraspannin 8..219 CDD:278750 62/237 (26%)
tetraspanin_LEL 106..187 CDD:239401 19/93 (20%)
Cd81NP_037219.2 Tetraspannin 10..226 CDD:395265 60/230 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19282
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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