DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ee and tsp-1

DIOPT Version :10

Sequence 1:NP_523631.1 Gene:Tsp42Ee / 35614 FlyBaseID:FBgn0029506 Length:228 Species:Drosophila melanogaster
Sequence 2:NP_498804.1 Gene:tsp-1 / 192096 WormBaseID:WBGene00006627 Length:244 Species:Caenorhabditis elegans


Alignment Length:122 Identity:30/122 - (24%)
Similarity:58/122 - (47%) Gaps:15/122 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 KSIGVVEVNGQVGFPIQALMPIILISLGSIVVFISFLGCCGAI---RESVCMTMSYATFLLILLI 96
            ||:...:.|.:| :.|.....||.:|||::|..:  ||...::   |:...:|  |...:::|:.
 Worm    54 KSLADAKFNIRV-WLIVVFWSIIGLSLGAVVTAV--LGMISSVWPKRKGFMIT--YLVLIIVLVS 113

  Fly    97 LQLTFVVLLFTHREEFENAMGNVIENAW--NSEHTYKGGVFDTIQKSLHCCGSSSAL 151
            |::...|.:...|....:...::|:..:  ||.:..|     .||...:|||..::|
 Worm   114 LEIGCGVAVLVRRNSLHDNTNSLIDAMYTTNSVNDLK-----IIQDKYNCCGIENSL 165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EeNP_523631.1 Tetraspanin 8..217 CDD:459767 30/122 (25%)
tsp-1NP_498804.1 Tetraspanin 29..>160 CDD:459767 27/115 (23%)

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