DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ee and tsp-7

DIOPT Version :9

Sequence 1:NP_001260753.1 Gene:Tsp42Ee / 35614 FlyBaseID:FBgn0029506 Length:228 Species:Drosophila melanogaster
Sequence 2:NP_492636.1 Gene:tsp-7 / 192062 WormBaseID:WBGene00006633 Length:232 Species:Caenorhabditis elegans


Alignment Length:231 Identity:68/231 - (29%)
Similarity:116/231 - (50%) Gaps:27/231 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GTSMVKYILFIFNTIVSVIGILGIVYG-VLILKSIGVVEVNGQVGFPIQALMPIILISLGSIVVF 67
            |.::|||:||:.|.::.|.|:..|:.| :|.||...|:::.|..    :...||:|:.:||:...
 Worm     5 GVTIVKYLLFLANLVLWVGGLSLIIVGSILQLKFDNVLDILGDE----RLATPILLLVIGSLCTL 65

  Fly    68 ISFLGCCGAIRESVCMTMSYATFLLILLILQLTFVVLLFTHREEFENAMGNVIENAWNSEHTYKG 132
            :.||||||||||:.|:|:|:|..|.:|:..::..|::.:...:.|...:||.::......|..:|
 Worm    66 LGFLGCCGAIRENYCLTVSFAVLLALLITCEIAAVIIGYALHDSFRLGIGNQLQTGMVRYHESRG 130

  Fly   133 --GVFDTIQKSLHCCGSSSALDYIGKGDLVPPSCCSGSCLIPTNYYPGCRGKFVELMTTGS---- 191
              ..:|...:...|||.:::.|:: ....:|.|||       .....||..:...|...|.    
 Worm   131 VESAWDKTHQLFECCGVTNSSDWL-TFTTIPDSCC-------IEEIEGCARENAPLFEPGCIHSV 187

  Fly   192 -----DNAKYVG---IGLIGIELIGFIFACCLANNV 219
                 .|...||   ..|..|:|:|..|||||:.::
 Worm   188 EQWVLKNGAMVGGICAVLAAIQLVGVCFACCLSKSI 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EeNP_001260753.1 Tetraspannin 8..219 CDD:278750 67/225 (30%)
tetraspanin_LEL 106..187 CDD:239401 16/82 (20%)
tsp-7NP_492636.1 Tetraspannin 8..223 CDD:278750 67/226 (30%)
NET-5_like_LEL 104..195 CDD:239418 18/98 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.910

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