DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ee and tsp-8

DIOPT Version :9

Sequence 1:NP_001260753.1 Gene:Tsp42Ee / 35614 FlyBaseID:FBgn0029506 Length:228 Species:Drosophila melanogaster
Sequence 2:NP_510445.1 Gene:tsp-8 / 181567 WormBaseID:WBGene00006634 Length:282 Species:Caenorhabditis elegans


Alignment Length:284 Identity:61/284 - (21%)
Similarity:111/284 - (39%) Gaps:84/284 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VKYILFIFNTIVSVIGILGIVYGVLILKSIGVVEVNGQVGFPIQALMP-------IILISLGSIV 65
            ::.:.|:||....:.|::....|:.:|......:.     |.:.:..|       ..|:..|:|:
 Worm     8 LRIVTFLFNFAFWLSGVVVFGLGIWLLFDPAASDF-----FALHSTHPGAFRYVGWFLVGAGAII 67

  Fly    66 VFISFLGCCGAIRESVCMTMSYATFLLILLILQLTFVVLLFTHREE-----FENAMGNVIENAWN 125
            :.:.:.||.||.:.:.|....:...|::...|:|...|.|| |::|     .|::|.:.|.|.::
 Worm    68 ILVGYFGCIGAWKMNQCALAFFCCILILAFFLELAAAVTLF-HKQEHIKHYVESSMYDTIRNRYS 131

  Fly   126 SEHTYKGGVFDTIQKSLHCCGSSSALDYI---------------------------------GKG 157
            ||..:| ..|||:|:...|||..:..|::                                 |.|
 Worm   132 SETAFK-DAFDTVQEKFECCGVKTYTDWLSARWDAEPSTQLEVNEEDAGRIEHGIGAFGGNKGTG 195

  Fly   158 -DLVPPSCCS--GSCLIPTNYYPGCRGKFVE---------LMTTGSDNAKYVGIG-----LIG-- 203
             ..||.|||:  |....|.|    |...|.:         :.|.|..:|.|..:.     ::|  
 Worm   196 YGRVPSSCCNEHGKLSYPNN----CGRSFSQAPLNTYAQFINTRGCADAVYESVSSSLSLIVGVC 256

  Fly   204 -----IELIGFIFA----CCLANN 218
                 ::|:|.:.:    ||..|:
 Worm   257 VVLCIVQLLGIVLSMTLCCCKGNS 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EeNP_001260753.1 Tetraspannin 8..219 CDD:278750 61/284 (21%)
tetraspanin_LEL 106..187 CDD:239401 30/130 (23%)
tsp-8NP_510445.1 Tetraspannin 8..276 CDD:278750 58/278 (21%)
Heme_Cu_Oxidase_I 13..>108 CDD:294196 20/99 (20%)
tetraspanin_LEL 108..243 CDD:239401 33/140 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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