DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ee and Cd9

DIOPT Version :10

Sequence 1:NP_523631.1 Gene:Tsp42Ee / 35614 FlyBaseID:FBgn0029506 Length:228 Species:Drosophila melanogaster
Sequence 2:NP_031683.1 Gene:Cd9 / 12527 MGIID:88348 Length:226 Species:Mus musculus


Alignment Length:247 Identity:69/247 - (27%)
Similarity:105/247 - (42%) Gaps:59/247 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GTSMVKYILFIFNTIVSVIGILGIVYGVLI-----LKSIGVVEVNGQVGFPIQALMPIILISLGS 63
            |:..:||:||.||.|..:.||..:..|:.:     .|||...| |....|....   .|||..|:
Mouse     6 GSKCIKYLLFGFNFIFWLAGIAVLAIGLWLRFDSQTKSIFEQE-NNHSSFYTGV---YILIGAGA 66

  Fly    64 IVVFISFLGCCGAIRESVCMTMSYATFLLILLILQLTFVVLLFTHREEFENAMGNVIENAWNSEH 128
            :::.:.|||||||::||.||...:..|||::..:::...|..:||::|       ||:..   :.
Mouse    67 LMMLVGFLGCCGAVQESQCMLGLFFGFLLVIFAIEIAAAVWGYTHKDE-------VIKEL---QE 121

  Fly   129 TYKGGVFDTIQK-----------------SLHCCGSSSALDYIGKGDLVPPSCCSGSCLIPTNYY 176
            .||    ||.||                 :|.|||.:..|:     ..:..:|.....|......
Mouse   122 FYK----DTYQKLRSKDEPQRETLKAIHMALDCCGIAGPLE-----QFISDTCPKKQLLESFQVK 177

  Fly   177 PGCRGKFVELMTTGSDNAKY-----VGIGLIGIELIGFIFA---CCLANNVR 220
            | |.....|:.     |.|:     ||||:..:.:.|.||:   ||.....|
Mouse   178 P-CPEAISEVF-----NNKFHIIGAVGIGIAVVMIFGMIFSMILCCAIRRSR 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EeNP_523631.1 Tetraspanin 8..217 CDD:459767 67/238 (28%)
Cd9NP_031683.1 Tetraspanin 10..217 CDD:459767 65/235 (28%)
CD9_LEL 109..191 CDD:239405 22/106 (21%)

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