DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ed and TSPAN6

DIOPT Version :10

Sequence 1:NP_523630.1 Gene:Tsp42Ed / 35613 FlyBaseID:FBgn0029507 Length:227 Species:Drosophila melanogaster
Sequence 2:NP_003261.1 Gene:TSPAN6 / 7105 HGNCID:11858 Length:245 Species:Homo sapiens


Alignment Length:237 Identity:58/237 - (24%)
Similarity:105/237 - (44%) Gaps:36/237 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KYVLFIFNILFVICGILLITFGSI-MVSTIKDFSGVGETFTANSVAIIILVLGCVVFLVAFMGCC 72
            |.||.|:..:|.|.|::|:..|.. .||....||.:.|  .|.:|..:::..|.|:.|:...||.
Human    18 KSVLLIYTFIFWITGVILLAVGIWGKVSLENYFSLLNE--KATNVPFVLIATGTVIILLGTFGCF 80

  Fly    73 GAIRENSCALTSYSVVM-LVLLVSQLALII-YVWVDHVQ--IQQSLEKIVQTIWDQRKTDALLMD 133
            ...|.::..|..|::.: ||.||..:|.|: :|:...::  .:.:.||.::.........:..:|
Human    81 ATCRASAWMLKLYAMFLTLVFLVELVAAIVGFVFRHEIKNSFKNNYEKALKQYNSTGDYRSHAVD 145

  Fly   134 TLQRSFKCCGLNGFADYGIT-------YPASCC-----------DSPSNGTCALTQVMTRSSCLK 180
            .:|.:..|||:..:.|:..|       :|.|||           |..:|..|.: :|||      
Human   146 KIQNTLHCCGVTDYRDWTDTNYYSEKGFPKSCCKLEDCTPQRDADKVNNEGCFI-KVMT------ 203

  Fly   181 AVDSFWDTNVSIIKYAGLGVTAVELVAFIFACCLANQTRNSQ 222
                ..::.:.::.....||...:|:....|.||:....|:|
Human   204 ----IIESEMGVVAGISFGVACFQLIGIFLAYCLSRAITNNQ 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EdNP_523630.1 Tetraspanin 8..216 CDD:459767 56/229 (24%)
TSPAN6NP_003261.1 Tetraspanin 17..235 CDD:459767 56/229 (24%)
TM4SF2_6_like_LEL 112..209 CDD:239414 20/107 (19%)

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