DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ed and cd81a

DIOPT Version :9

Sequence 1:NP_001286152.1 Gene:Tsp42Ed / 35613 FlyBaseID:FBgn0029507 Length:227 Species:Drosophila melanogaster
Sequence 2:NP_571593.2 Gene:cd81a / 58031 ZFINID:ZDB-GENE-000831-5 Length:236 Species:Danio rerio


Alignment Length:233 Identity:55/233 - (23%)
Similarity:102/233 - (43%) Gaps:30/233 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VKYVLFIFNILF-----VICGILLITFGSIMVSTIKDFSGVG-ETFTANSVAIIILV-LGCVVFL 65
            :||:||.||.:|     ||.|:.|........|::.|....| |:.|...:::.||: :|.|:..
Zfish    12 IKYMLFFFNFIFWLAGCVILGVSLWLRHDTKTSSLLDLKYEGTESPTTFYISVYILIAVGAVMMF 76

  Fly    66 VAFMGCCGAIRENSCALTSYSVVMLVLLVSQLALIIYVWVDHVQIQQSLEKIVQTIWDQRKT--- 127
            |.|:||.|||:|:.|.|.::...:::|...::|..|:.:::..:|.:.:.....:::|:..|   
Zfish    77 VGFLGCYGAIQESQCLLGTFFACLVLLFACEVAAGIWGFMNKDKISKEVIGFYDSVYDKGATYNT 141

  Fly   128 -----DALLMDTLQRSFKCCG----LNGFADYGITYPASCCDSPSNGTCALTQVMTRSSCLKAVD 183
                 ...::.....:.:|||    .....|..:|           .||..........|...:.
Zfish   142 DNKNPATAVLKVFHETLQCCGKGNLFTAIVDRWLT-----------DTCPEHLRTNAVDCHTEIK 195

  Fly   184 SFWDTNVSIIKYAGLGVTAVELVAFIFACCLANQTRNS 221
            :.:...:|:|..|.|.|..:.:...||:..|....|||
Zfish   196 NLFTDKISLIGIAALVVAVIMIFEMIFSMVLCCGIRNS 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EdNP_001286152.1 Tetraspannin 8..217 CDD:278750 52/227 (23%)
tetraspanin_LEL 104..189 CDD:239401 11/96 (11%)
cd81aNP_571593.2 Tetraspannin 11..230 CDD:278750 52/228 (23%)
CD81_like_LEL 115..202 CDD:239404 11/97 (11%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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