Protein Alignment Tsp42Ed and tspan3b

DIOPT Version :10

• Sequence 1: NP_523630.1
• Gene: Tsp42Ed / 35613
• FlyBaseID: FBgn0029507
• Length: 227
• Species: Drosophila melanogaster
• Sequence 2: NP_001076335.1
• Gene: tspan3b / 569864
• ZFINID: ZDB-GENE-070424-42
• Length: 253
• Species: Danio rerio
• Alignment Length: 229
• Identity: 57/229 - (24%)
• Similarity: 113/229 - (49%)
• Gaps: 20/229 - (8%)

  Fly     3 CGGVFVKYVLFIFNILFVICGILLITFGSIMVSTIKDFSGVGETFTANSVAIIILVLGCVVFLVA 67
            ||.:..|.||...|::|.....:|...|:.:..|..|:....|.......|::|:.:|.::|::.
Zfish     4 CGVISSKTVLVFLNLIFWAAAGILCYIGAYVFITYDDYDHFFEDIYTFIPAMVIIAVGTLLFVIG 68

  Fly    68 FMGCCGAIRENSCALTSYSVVMLVLLVSQLALIIYVWVDHVQIQQSLEKIVQTIWDQRK---TDA 129
            |:|||..|||:.|.|.::|.|:|::..:::.:::..::...:::..:...:|.::::.|   |||
Zfish    69 FIGCCATIRESRCGLVTFSAVLLLVFATEVVVVVLGYIYRAKVEAVVNHSIQKVYNEYKGTNTDA 133

  Fly   130 --LLMDTLQRSFKCCGLNGFADYGITY----------PASCCD---SPSNGTCALTQVMTRSSC- 178
              ..:|.:||...|||::.::|:..|:          |.|||.   |...||......:....|
Zfish   134 PSRAIDYVQRQLHCCGIHNYSDWMNTHWFIESKNNSVPVSCCKPTISNRTGTLMRPGDLYPEGCE 198

  Fly   179 LKAVDSFWDTNVSIIKYAGLGVTAVELVAFIFAC 212
            :..|....|..:.:| .|.|...|::::..:.||
Zfish   199 VLVVKKLKDIMLYVI-LAALTFAAIQMLGLLCAC 231

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Tsp42Ed	NP_523630.1	Tetraspanin	8..216	CDD:459767	55/224 (25%)
tspan3b	NP_001076335.1	Tetraspanin	9..235	CDD:459767	55/224 (25%)
		TM4SF8_like_LEL	104..209	CDD:239416	23/104 (22%)